Factsheet for Zm00001d013004_P001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d028948_P001
Zm00001d033980_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G39670.1	Zm00001d005003_P002	AT2G41090.1	17360592
AT5G39670.1	Zm00001d008278_P001	AT2G41090.1	17360592
AT5G39670.1	Zm00001d010649_P001	AT2G41090.1	17360592
AT5G39670.1	Zm00001d028948_P001	AT2G41090.1	17360592
AT5G39670.1	Zm00001d038543_P004	AT2G41090.1	17360592
AT5G39670.1	Zm00001d038545_P001	AT2G41090.1	17360592
AT5G39670.1	Zm00001d041430_P001	AT2G41090.1	17360592
AT5G39670.1	Zm00001d043144_P001	AT2G41090.1	17360592
AT5G39670.1	Zm00001d047597_P001	AT2G41090.1	17360592
AT5G39670.1	Zm00001d052415_P001	AT2G41090.1	17360592
AT5G39670.1	Zm00001d005003_P002	AT2G41100.1	17360592
AT5G39670.1	Zm00001d008278_P001	AT2G41100.1	17360592
AT5G39670.1	Zm00001d010649_P001	AT2G41100.1	17360592
AT5G39670.1	Zm00001d028948_P001	AT2G41100.1	17360592
AT5G39670.1	Zm00001d038543_P004	AT2G41100.1	17360592
AT5G39670.1	Zm00001d038545_P001	AT2G41100.1	17360592
AT5G39670.1	Zm00001d041430_P001	AT2G41100.1	17360592
AT5G39670.1	Zm00001d043144_P001	AT2G41100.1	17360592
AT5G39670.1	Zm00001d047597_P001	AT2G41100.1	17360592
AT5G39670.1	Zm00001d052415_P001	AT2G41100.1	17360592
AT5G39670.1	Zm00001d033980_P001	AT4G14640.1	17360592
AT5G39670.1	Zm00001d005003_P002	AT5G21274.1	17360592
AT5G39670.1	Zm00001d008278_P001	AT5G21274.1	17360592
AT5G39670.1	Zm00001d010649_P001	AT5G21274.1	17360592
AT5G39670.1	Zm00001d028948_P001	AT5G21274.1	17360592
AT5G39670.1	Zm00001d038543_P004	AT5G21274.1	17360592
AT5G39670.1	Zm00001d038545_P001	AT5G21274.1	17360592
AT5G39670.1	Zm00001d041430_P001	AT5G21274.1	17360592
AT5G39670.1	Zm00001d043144_P001	AT5G21274.1	17360592
AT5G39670.1	Zm00001d047597_P001	AT5G21274.1	17360592
AT5G39670.1	Zm00001d052415_P001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU90756	Sorghum	endoplasmic reticulum, vacuole	53.88	51.98
Os03t0812400-01	Rice	endoplasmic reticulum, plastid	43.84	45.07
HORVU5Hr1G111520.1	Barley	plastid	39.73	42.23
TraesCS5D01G481000.1	Wheat	extracellular, plastid	36.99	40.7
Bra000299.1-P	Field mustard	cytosol	13.24	40.28
Bra032444.1-P	Field mustard	cytosol	13.24	40.28
CDY06192	Canola	cytosol	13.24	40.28
CDY09997	Canola	cytosol	13.24	40.28
TraesCS5A01G467800.1	Wheat	endoplasmic reticulum, plastid	36.07	39.7
TraesCS5B01G480300.1	Wheat	endoplasmic reticulum, plastid	36.53	39.41
Bra030632.1-P	Field mustard	cytosol	14.61	39.02
Os03t0812800-00	Rice	extracellular	37.44	38.14
CDY35936	Canola	cytosol	14.61	38.1
CDY28045	Canola	cytosol	14.61	38.1
GSMUA_Achr7P21710_001	Banana	cytosol	21.92	35.82
PGSC0003DMT400086481	Potato	cytosol	13.7	33.71
Zm00001d005766_P001	Maize	plastid	26.48	32.22
CDY09996	Canola	cytosol	12.79	30.77
VIT_14s0108g01000.t01	Wine grape	cytosol	20.09	28.21
GSMUA_AchrUn_...	Banana	cytosol	21.0	27.88
Solyc12g009630.1.1	Tomato	endoplasmic reticulum, extracellular, golgi	19.63	27.56
AT3G29000.1	Thale cress	endoplasmic reticulum	22.37	25.26
AT5G39670.1	Thale cress	plastid	21.92	23.53
KRH40081	Soybean	cytosol	21.46	22.71
KRH01190	Soybean	cytosol, nucleus, vacuole	21.0	22.22
KRH16684	Soybean	cytosol	17.35	19.69
Zm00001d048913_P001	Maize	plastid	14.61	15.92

Protein Annotations

EnsemblPlants:Zm00001d013004_P001	EnsemblPlants:Zm00001d013004_T001	EnsemblPlantsGene:Zm00001d013004	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR45512
PFAM:PF13499	PFscan:PS50222	PRINTS:PR01697	ProteinID:AQK62075.1	ScanProsite:PS00018	SEG:seg
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000221B198	UniProt:A0A1D6GER7	MapMan:35.2	:

Description

Calcium-binding allergen Ole e 8

Coordinates

chr5:-:2995849..2996508

Molecular Weight (calculated)

23080.5 Da

IEP (calculated)

4.633

GRAVY (calculated)

0.053

Length

219 amino acids

Sequence
(BLAST)

001: MLELLVLPPA LDLLLHSCLI VSVSSLLIML ALQPLLPGGT DVASASRGVR SASRAVLARL LPSSSRTRSG VPVAPPPPPP PPRHCELCAA SSWPGTVAAV
101: TATLHLDADA DGDTERSSIS SAEEDGTACG GCAALAAVEE LLGSKEATER ELREAFRVFD RDEDGFVGAA ELWYVLRRLG MGGSSSARED CARMIAAHDA
201: DGDGRISFRE FRDMMERAV

Best Arabidopsis Sequence Match ( AT1G18210.1 )
(BLAST)

001: MASANPETAK PTPATVDMAN PEELKKVFDQ FDSNGDGKIS VLELGGVFKA MGTSYTETEL NRVLEEVDTD RDGYINLDEF STLCRSSSSA AEIRDAFDLY
101: DQDKNGLISA SELHQVLNRL GMSCSVEDCT RMIGPVDADG DGNVNFEEFQ KMMTSSSLLN SNGSAAPPST

Arabidopsis Description

CML27Probable calcium-binding protein CML27 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE22]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.