Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06192 | Canola | cytosol | 97.22 | 97.22 |
| Bra030632.1-P | Field mustard | cytosol | 93.06 | 81.71 |
| CDY09996 | Canola | cytosol | 91.67 | 72.53 |
| CDY35936 | Canola | cytosol | 76.39 | 65.48 |
| CDY28045 | Canola | cytosol | 75.0 | 64.29 |
| PGSC0003DMT400086481 | Potato | cytosol | 51.39 | 41.57 |
| CDX74438 | Canola | cytosol | 41.67 | 28.04 |
| CDY30262 | Canola | cytosol | 41.67 | 28.04 |
| CDY20005 | Canola | cytosol | 40.28 | 27.62 |
| Solyc12g009630.1.1 | Tomato | endoplasmic reticulum, extracellular, golgi | 56.94 | 26.28 |
| GSMUA_Achr7P21710_001 | Banana | cytosol | 44.44 | 23.88 |
| GSMUA_Achr9P17010_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 43.06 | 19.87 |
| GSMUA_AchrUn_... | Banana | cytosol | 41.67 | 18.18 |
| Os12t0140050-00 | Rice | cytosol | 37.5 | 17.88 |
| CDX99659 | Canola | extracellular | 43.06 | 17.51 |
| CDY66024 | Canola | endoplasmic reticulum, extracellular | 43.06 | 16.85 |
| OQU88717 | Sorghum | cytosol | 43.06 | 16.85 |
| TraesCS1B01G470900.1 | Wheat | endoplasmic reticulum, golgi | 43.06 | 16.67 |
| TraesCS1A01G435200.1 | Wheat | endoplasmic reticulum, extracellular | 43.06 | 16.67 |
| TraesCS1D01G444200.1 | Wheat | endoplasmic reticulum, golgi | 44.44 | 16.58 |
| TraesCS1A01G435100.1 | Wheat | extracellular | 40.28 | 16.57 |
| EER98893 | Sorghum | plastid | 43.06 | 16.4 |
| Zm00001d005766_P001 | Maize | plastid | 40.28 | 16.11 |
| TraesCS5D01G238700.1 | Wheat | plastid | 38.89 | 16.09 |
| CDY37011 | Canola | plastid | 43.06 | 16.06 |
| CDX85236 | Canola | endoplasmic reticulum, extracellular | 41.67 | 15.96 |
| TraesCS5A01G229000.1 | Wheat | plastid | 38.89 | 15.73 |
| HORVU1Hr1G094160.1 | Barley | extracellular | 40.28 | 15.59 |
| HORVU1Hr1G094230.1 | Barley | extracellular, golgi | 40.28 | 15.59 |
| TraesCS1B01G471000.1 | Wheat | endoplasmic reticulum, golgi | 40.28 | 15.59 |
| HORVU5Hr1G066260.1 | Barley | plastid | 38.89 | 15.38 |
| CDY15945 | Canola | plastid | 41.67 | 15.31 |
| CDX74439 | Canola | endoplasmic reticulum, extracellular, plastid, vacuole | 41.67 | 15.08 |
| CDX67435 | Canola | plastid | 40.28 | 14.8 |
| CDY44416 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plastid | 37.5 | 14.44 |
| Zm00001d013004_P001 | Maize | vacuole | 40.28 | 13.24 |
| OQU90756 | Sorghum | endoplasmic reticulum, vacuole | 40.28 | 12.78 |
| Os03t0812400-01 | Rice | endoplasmic reticulum, plastid | 37.5 | 12.68 |
| HORVU5Hr1G111520.1 | Barley | plastid | 34.72 | 12.14 |
| Os03t0812800-00 | Rice | extracellular | 36.11 | 12.09 |
| TraesCS5B01G227700.1 | Wheat | plastid | 37.5 | 11.84 |
| TraesCS5A01G467800.1 | Wheat | endoplasmic reticulum, plastid | 31.94 | 11.56 |
| TraesCS5D01G481000.1 | Wheat | extracellular, plastid | 31.94 | 11.56 |
| TraesCS5B01G480300.1 | Wheat | endoplasmic reticulum, plastid | 31.94 | 11.33 |
Protein Annotations
| EnsemblPlants:CDY09997 | EnsemblPlantsGene:GSBRNA2T00031777001 | Gene3D:1.10.238.10 | GO:A0A078FAE0 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR10891 |
| PANTHER:PTHR10891:SF662 | PFAM:PF13499 | PFscan:PS50222 | ProteinID:CDY09997 | ProteinID:CDY09997.1 | ScanProsite:PS00018 |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0004EDF835 | UniProt:A0A078FAE0 | MapMan:35.1 | : |
Description
BnaC08g44540DBnaC08g44540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FAE0]
Coordinates
chrLK032000:-:410442..410660
Molecular Weight (calculated)
7924.5 Da
IEP (calculated)
4.982
GRAVY (calculated)
-0.374
Length
72 amino acids
Sequence
(BLAST)
(BLAST)
1: MKEAFNVFDQ NGDGFITVDE LKAVLSSLGL KQGKTLDDCT KMIKQVDVDG DGRVNYKEFR QMMKGGGFSA LS
001: MDPTELKRVF QMFDKNGDGT ITGKELSETL RSLGIYIPDK ELTQMIEKID VNGDGCVDID EFGELYKTIM DEEDEEEEDM KEAFNVFDQN GDGFITVDEL
101: KAVLSSLGLK QGKTLDDCKK MIKKVDVDGD GRVNYKEFRQ MMKGGGFNSL
101: KAVLSSLGLK QGKTLDDCKK MIKKVDVDGD GRVNYKEFRQ MMKGGGFNSL
Arabidopsis Description
CML7Calmodulin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNE7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.