CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01631
EES09201
EES16322
KXG37587
KXG37588
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G39670.1	EES01631	AT2G41090.1	17360592
AT5G39670.1	EES09201	AT2G41090.1	17360592
AT5G39670.1	EES16322	AT2G41090.1	17360592
AT5G39670.1	OQU78227	AT2G41090.1	17360592
AT5G39670.1	EES01631	AT2G41100.1	17360592
AT5G39670.1	EES09201	AT2G41100.1	17360592
AT5G39670.1	EES16322	AT2G41100.1	17360592
AT5G39670.1	OQU78227	AT2G41100.1	17360592
AT5G39670.1	KXG37587	AT4G14640.1	17360592
AT5G39670.1	KXG37588	AT4G14640.1	17360592
AT5G39670.1	EES01631	AT5G21274.1	17360592
AT5G39670.1	EES09201	AT5G21274.1	17360592
AT5G39670.1	EES16322	AT5G21274.1	17360592
AT5G39670.1	OQU78227	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005766_P001	Maize	plastid	59.26	62.22
HORVU5Hr1G066260.1	Barley	plastid	56.61	58.79
TraesCS5D01G238700.1	Wheat	plastid	53.44	58.05
TraesCS5A01G229000.1	Wheat	plastid	52.91	56.18
TraesCS5B01G227700.1	Wheat	plastid	56.08	46.49
Bra030632.1-P	Field mustard	cytosol	19.58	45.12
Bra032444.1-P	Field mustard	cytosol	16.4	43.06
CDY06192	Canola	cytosol	16.4	43.06
CDY09997	Canola	cytosol	16.4	43.06
Bra000299.1-P	Field mustard	cytosol	15.87	41.67
CDY28045	Canola	cytosol	17.99	40.48
CDY35936	Canola	cytosol	17.99	40.48
PGSC0003DMT400086481	Potato	cytosol	17.46	37.08
CDY09996	Canola	cytosol	15.87	32.97
VIT_14s0108g01000.t01	Wine grape	cytosol	26.98	32.69
GSMUA_Achr9P17010_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	23.81	28.85
AT3G29000.1	Thale cress	endoplasmic reticulum	28.57	27.84
Solyc12g009630.1.1	Tomato	endoplasmic reticulum, extracellular, golgi	21.69	26.28
KRH40081	Soybean	cytosol	27.51	25.12
AT5G39670.1	Thale cress	plastid	26.45	24.51
EES10045	Sorghum	endoplasmic reticulum, plasma membrane	25.4	24.49
OQU88717	Sorghum	cytosol	23.81	24.46
KRH01190	Soybean	cytosol, nucleus, vacuole	26.45	24.15
OQU90756	Sorghum	endoplasmic reticulum, vacuole	27.51	22.91
KRH16684	Soybean	cytosol	22.22	21.76

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.2	EntrezGene:8060240	UniProt:C5XC91	ncoils:Coil	EnsemblPlants:EER98893
ProteinID:EER98893	ProteinID:EER98893.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR002048
PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR45512	SMART:SM00054	EnsemblPlantsGene:SORBI_3002G199500
SUPFAM:SSF47473	unigene:Sbi.7011	TMHMM:TMhelix	UniParc:UPI0001A83FD0	RefSeq:XP_002462372.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:58905215..58906639

Molecular Weight (calculated)

19554.6 Da

IEP (calculated)

4.026

GRAVY (calculated)

0.058

Length

189 amino acids

Sequence
(BLAST)

001: MEMASSSTAP TTSYYNVSVA QAVFTLSINA ILVWLTTVIK SSSSSSSSSS SGRRRDAAPA ATPAPASATA PPPSPSSPAK PAAAAVDMDV VLGLMGAGAS
101: AVSVGFEEAA ALFEEEEATV EEAREAFAVF DRNGDGFIDA AELRSVLTSL GFQAGVADAE CQRMIDAYDG DRDGRIDFLE FVKLMETSH

Best Arabidopsis Sequence Match ( AT3G29000.1 )
(BLAST)

001: MESKSSSSSL PLFALFNFFL ISFCRWVSST RIFLSRFVPL LQHHQRVFDK KNNKDQQETL TKQEDDDDDD DDDDDDDDDD IDISREEAEM VMRSLGLFYN
101: DDQLQEQYSA KEVSSLFEEK EASLEEVKQA FDVFDENKDG FIDAIELQRV LTILGFKQGS YLDNCLVMIR SLDGNKDGKI DFNEFVKFME TSFY

Arabidopsis Description

CML45Probable calcium-binding protein CML30 [Source:UniProtKB/Swiss-Prot;Acc:Q9MBG5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.