CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G39670.1	KRG89812	AT2G41090.1	17360592
AT5G39670.1	KRG94975	AT2G41090.1	17360592
AT5G39670.1	KRH18664	AT2G41090.1	17360592
AT5G39670.1	KRG89812	AT2G41100.1	17360592
AT5G39670.1	KRG94975	AT2G41100.1	17360592
AT5G39670.1	KRH18664	AT2G41100.1	17360592
AT5G39670.1	KRH31638	AT4G14640.1	17360592
AT5G39670.1	KRH69070	AT4G14640.1	17360592
AT5G39670.1	KRG89812	AT5G21274.1	17360592
AT5G39670.1	KRG94975	AT5G21274.1	17360592
AT5G39670.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01190	Soybean	cytosol, nucleus, vacuole	82.9	77.29
KRH40081	Soybean	cytosol	76.17	71.01
Bra039037.1-P	Field mustard	cytosol	27.46	50.48
CDY20005	Canola	cytosol	27.46	50.48
CDX74438	Canola	cytosol	27.98	50.47
CDY30262	Canola	cytosol	27.98	50.47
Solyc02g067220.2.1	Tomato	extracellular	27.46	37.86
CDX85236	Canola	endoplasmic reticulum, extracellular	36.79	37.77
Bra028438.1-P	Field mustard	plastid	37.82	37.24
CDX67435	Canola	plastid	37.82	37.24
CDY37011	Canola	plastid	36.79	36.79
CDY66024	Canola	endoplasmic reticulum, extracellular	34.72	36.41
Bra030349.1-P	Field mustard	endoplasmic reticulum, plastid	34.72	36.22
AT5G39670.1	Thale cress	plastid	37.82	35.78
Bra025654.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	34.72	35.64
AT3G29000.1	Thale cress	endoplasmic reticulum	35.75	35.57
VIT_14s0108g01000.t01	Wine grape	cytosol	28.5	35.26
CDY15945	Canola	plastid	35.75	35.2
CDX74439	Canola	endoplasmic reticulum, extracellular, plastid, vacuole	36.27	35.18
Bra033077.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion, plastid	32.12	33.33
CDY44416	Canola	cytosol, endoplasmic reticulum, mitochondrion, plastid	32.12	33.16
CDX99659	Canola	extracellular	30.05	32.77
PGSC0003DMT400064699	Potato	golgi	32.12	32.12
KRH50574	Soybean	plastid	26.94	31.71
Solyc02g088090.1.1	Tomato	extracellular, golgi	29.02	30.94
PGSC0003DMT400003364	Potato	endoplasmic reticulum, golgi	29.02	29.95
GSMUA_Achr7P21710_001	Banana	cytosol	20.21	29.1
KRH70747	Soybean	cytosol	22.28	28.67
KRG89588	Soybean	endoplasmic reticulum, golgi	26.42	26.7
Zm00001d005766_P001	Maize	plastid	24.35	26.11
GSMUA_Achr9P17010_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.73	25.64
KRH74886	Soybean	extracellular, golgi	22.8	23.53
Os12t0140050-00	Rice	cytosol	18.13	23.18
HORVU5Hr1G066260.1	Barley	plastid	21.76	23.08
GSMUA_AchrUn_...	Banana	cytosol	19.69	23.03
HORVU1Hr1G094230.1	Barley	extracellular, golgi	21.76	22.58
TraesCS1A01G435200.1	Wheat	endoplasmic reticulum, extracellular	21.76	22.58
TraesCS1B01G470900.1	Wheat	endoplasmic reticulum, golgi	21.76	22.58
TraesCS1A01G435100.1	Wheat	extracellular	20.21	22.29
EER98893	Sorghum	plastid	21.76	22.22
TraesCS1B01G471000.1	Wheat	endoplasmic reticulum, golgi	21.24	22.04
TraesCS5D01G238700.1	Wheat	plastid	19.69	21.84
OQU88717	Sorghum	cytosol	20.73	21.74
TraesCS5A01G229000.1	Wheat	plastid	19.69	21.35
TraesCS1D01G444200.1	Wheat	endoplasmic reticulum, golgi	21.24	21.24
HORVU1Hr1G094160.1	Barley	extracellular	20.21	20.97
Os03t0812400-01	Rice	endoplasmic reticulum, plastid	22.8	20.66
Zm00001d013004_P001	Maize	vacuole	19.69	17.35
OQU90756	Sorghum	endoplasmic reticulum, vacuole	20.21	17.18
TraesCS5B01G227700.1	Wheat	plastid	20.21	17.11
TraesCS5B01G480300.1	Wheat	endoplasmic reticulum, plastid	15.54	14.78
TraesCS5D01G481000.1	Wheat	extracellular, plastid	15.03	14.57
Os03t0812800-00	Rice	extracellular	16.06	14.42
TraesCS5A01G467800.1	Wheat	endoplasmic reticulum, plastid	14.51	14.07
HORVU5Hr1G111520.1	Barley	plastid	13.99	13.11

Protein Annotations

EMBL:ACUP02008985	EnsemblPlants:KRH16684	EnsemblPlantsGene:GLYMA_14G170400	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR45512
PANTHER:PTHR45512:SF1	PFAM:PF13499	PFscan:PS50222	ProteinID:KRH16684	ProteinID:KRH16684.1	ScanProsite:PS00018
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0006EE0E91	UniProt:A0A0R0GE95	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr14:+:42192046..42192671

Molecular Weight (calculated)

22767.8 Da

IEP (calculated)

4.473

GRAVY (calculated)

-0.473

Length

193 amino acids

Sequence
(BLAST)

001: MVILREFDFL ISDGKGSQNY GNSTSPLFGL VDLSLYHTCF YNLQCFSLSF WCFLLYQLFS NDSKVKAEEQ VSKPGVFSHQ ENESKGNIDS ENYLERDEKV
101: RNFRRSMVPR SFQNCFEEQE PSLEEVKQDF DVFDENKDGF IDDEELQRVL CILGLKEAAK LENCHKMIRI FDTNQDGRIY FIEFVKIMEN CFR

Best Arabidopsis Sequence Match ( AT5G39670.1 )
(BLAST)

001: MTENQLYSFI TMKSSLSKCK QSSSLSFPLF GLINFFLIGF FRWVSFAQLF FSRFWPLVQH QQCVSEKKSK DLEFQTSIKH EEYRDDDDDG LCREDVGMVM
101: KSLGLSTDQE NEGLQKQYSS KEVSNLFEEK EPSLEEVKQA FDVFDENRDG FIDPIDLQRV LTILGLKQGS NLENCRRMIR SFDGSKDGRI DFYGFVKFME
201: NNFC

Arabidopsis Description

CML46Probable calcium-binding protein CML45 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z27]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.