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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 3
  • mitochondrion 2
  • extracellular 3
  • plasma membrane 2
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400064699 Potato golgi 75.0 54.4
Solyc02g088090.1.1 Tomato extracellular, golgi 55.71 43.09
Bra039037.1-P Field mustard cytosol 27.86 37.14
CDY20005 Canola cytosol 27.86 37.14
CDX74438 Canola cytosol 26.43 34.58
CDY30262 Canola cytosol 26.43 34.58
KRH16684 Soybean cytosol 37.86 27.46
CDY66024 Canola endoplasmic reticulum, extracellular 35.0 26.63
CDX85236 Canola endoplasmic reticulum, extracellular 35.71 26.6
KRH40081 Soybean cytosol 39.29 26.57
Bra030349.1-P Field mustard endoplasmic reticulum, plastid 35.0 26.49
CDY37011 Canola plastid 36.43 26.42
Bra025654.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 35.0 26.06
Bra028438.1-P Field mustard plastid 36.43 26.02
CDX67435 Canola plastid 36.43 26.02
Bra033077.1-P Field mustard cytosol, endoplasmic reticulum, mitochondrion, plastid 34.29 25.81
KRH01190 Soybean cytosol, nucleus, vacuole 37.86 25.6
CDY15945 Canola plastid 35.71 25.51
AT3G29000.1 Thale cress endoplasmic reticulum 35.0 25.26
CDY44416 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 33.57 25.13
Solyc12g009630.1.1 Tomato endoplasmic reticulum, extracellular, golgi 27.86 25.0
CDX99659 Canola extracellular 31.43 24.86
AT5G39670.1 Thale cress plastid 35.71 24.51
VIT_14s0108g01000.t01 Wine grape cytosol 27.14 24.36
CDX74439 Canola endoplasmic reticulum, extracellular, plastid, vacuole 34.29 24.12
Solyc06g069740.1.1 Tomato endoplasmic reticulum 27.14 20.54
Solyc03g115930.1.1 Tomato cytosol 27.14 18.81
Protein Annotations
Gene3D:1.10.238.10MapMan:35.1InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domGO:GO:0003674
GO:GO:0005488GO:GO:0005509GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:IPR002048
UniProt:K4B754PFAM:PF13499ScanProsite:PS00018PFscan:PS50222PANTHER:PTHR45512PANTHER:PTHR45512:SF1
SMART:SM00054SUPFAM:SSF47473EnsemblPlantsGene:Solyc02g067220.2EnsemblPlants:Solyc02g067220.2.1TMHMM:TMhelixUniParc:UPI00027691C0
SEG:seg:::::
Description
No Description!
Coordinates
chr2:-:37407185..37408226
Molecular Weight (calculated)
16055.3 Da
IEP (calculated)
5.626
GRAVY (calculated)
-0.104
Length
140 amino acids
Sequence
(BLAST)
001: MSASNYLNRF SIKKLPVSTV PVPLVIHGLV GFFLLYIIFD WGRKFLNFLS QSQKSKSEKG NHNATTTSHH NNVPYLLVDE VFDVFDENRD GFIDEMELQK
101: VLCALGFKEA AELENCRKMI LAFDGNKDGK INFEEFVEMI
Best Arabidopsis Sequence Match ( AT5G39670.1 )
(BLAST)
001: MTENQLYSFI TMKSSLSKCK QSSSLSFPLF GLINFFLIGF FRWVSFAQLF FSRFWPLVQH QQCVSEKKSK DLEFQTSIKH EEYRDDDDDG LCREDVGMVM
101: KSLGLSTDQE NEGLQKQYSS KEVSNLFEEK EPSLEEVKQA FDVFDENRDG FIDPIDLQRV LTILGLKQGS NLENCRRMIR SFDGSKDGRI DFYGFVKFME
201: NNFC
Arabidopsis Description
CML46Probable calcium-binding protein CML45 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z27]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.