Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
25464976
nucleus: 28394025 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400058435 | Potato | cytosol | 100.0 | 100.0 |
| Bra002368.1-P | Field mustard | cytosol | 99.33 | 99.33 |
| Bra006595.1-P | Field mustard | cytosol | 99.33 | 99.33 |
| Bra020155.1-P | Field mustard | cytosol | 99.33 | 99.33 |
| Solyc10g077010.1.1 | Tomato | cytosol | 99.33 | 99.33 |
| Solyc11g072240.1.1 | Tomato | cytosol | 99.33 | 99.33 |
| Solyc12g099990.1.1 | Tomato | nucleus | 99.33 | 99.33 |
| Bra012037.1-P | Field mustard | cytosol | 98.66 | 98.66 |
| Bra019453.1-P | Field mustard | cytosol | 98.66 | 98.66 |
| CDY04474 | Canola | cytosol | 98.66 | 98.66 |
| CDY56411 | Canola | cytosol | 98.66 | 98.66 |
| CDY65072 | Canola | cytosol | 98.66 | 98.66 |
| Solyc10g081170.1.1 | Tomato | extracellular | 98.66 | 98.66 |
| CDX92401 | Canola | cytosol | 88.59 | 98.51 |
| GSMUA_Achr5P27590_001 | Banana | cytosol | 76.51 | 98.28 |
| AT3G56800.1 | Thale cress | cytosol | 97.99 | 97.99 |
| AT5G21274.1 | Thale cress | cytosol | 97.99 | 97.99 |
| Bra000214.1-P | Field mustard | cytosol | 97.99 | 97.99 |
| Bra003251.1-P | Field mustard | cytosol | 97.99 | 97.99 |
| Bra014671.1-P | Field mustard | cytosol | 97.99 | 97.99 |
| GSMUA_Achr10P... | Banana | cytosol | 97.99 | 97.99 |
| GSMUA_Achr6P15990_001 | Banana | cytosol | 97.99 | 97.99 |
| GSMUA_Achr9P17280_001 | Banana | cytosol | 97.99 | 97.99 |
| Os01t0267900-01 | Rice | cytosol | 97.99 | 97.99 |
| Os01t0279300-01 | Rice | cytosol, plasma membrane, plastid | 97.99 | 97.99 |
| Os03t0319300-01 | Rice | cytosol, extracellular, nucleus | 97.99 | 97.99 |
| Os07t0687200-02 | Rice | cytosol | 97.99 | 97.99 |
| Bra007269.1-P | Field mustard | cytosol | 97.32 | 97.32 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane | 97.32 | 97.32 |
| GSMUA_Achr3P09330_001 | Banana | cytosol | 97.32 | 97.32 |
| GSMUA_Achr5P07820_001 | Banana | cytosol | 97.32 | 97.32 |
| GSMUA_Achr6P23670_001 | Banana | cytosol | 97.32 | 97.32 |
| Bra034981.1-P | Field mustard | cytosol | 94.63 | 97.24 |
| CDY12321 | Canola | cytosol | 94.63 | 97.24 |
| Zm00001d008278_P001 | Maize | cytosol | 82.55 | 96.85 |
| GSMUA_Achr2P01120_001 | Banana | cytosol | 96.64 | 96.64 |
| GSMUA_Achr3P25040_001 | Banana | cytosol | 96.64 | 96.64 |
| Os05t0491100-01 | Rice | cytosol, extracellular | 96.64 | 96.64 |
| VIT_06s0009g01910.t01 | Wine grape | cytosol | 98.66 | 96.08 |
| CDY55678 | Canola | cytosol | 95.97 | 95.97 |
| Bra025438.1-P | Field mustard | cytosol | 72.48 | 95.58 |
| TraesCS1A01G308800.1 | Wheat | cytosol | 83.89 | 95.42 |
| Bra004166.1-P | Field mustard | cytosol | 95.3 | 95.3 |
| CDX96148 | Canola | cytosol | 95.3 | 95.3 |
| GSMUA_Achr11P... | Banana | cytosol | 65.1 | 95.1 |
| CDY27651 | Canola | cytosol | 94.63 | 94.0 |
| CDX99690 | Canola | cytosol | 93.96 | 93.96 |
| Solyc03g098050.2.1 | Tomato | nucleus | 91.95 | 91.95 |
| AT2G41110.2 | Thale cress | cytosol | 97.99 | 90.68 |
| AT1G66410.2 | Thale cress | cytosol | 95.97 | 89.94 |
| KRH18664 | Soybean | cytosol | 83.89 | 89.29 |
| TraesCS3A01G184500.1 | Wheat | cytosol | 97.32 | 88.41 |
| TraesCS3D01G188600.1 | Wheat | cytosol | 97.99 | 87.43 |
| Zm00001d038545_P001 | Maize | cytosol, mitochondrion | 85.91 | 85.91 |
| Zm00001d047597_P001 | Maize | cytosol | 83.89 | 85.03 |
| TraesCS2B01G113800.2 | Wheat | cytosol | 97.99 | 83.43 |
| TraesCS3B01G219900.1 | Wheat | cytosol | 97.32 | 83.33 |
| Bra034317.1-P | Field mustard | cytosol | 98.66 | 82.12 |
| CDY48191 | Canola | cytosol | 98.66 | 82.12 |
| AT5G37780.3 | Thale cress | cytosol | 95.97 | 81.71 |
| CDX77060 | Canola | cytosol | 98.66 | 81.67 |
| AT2G27030.3 | Thale cress | cytosol | 97.99 | 80.66 |
| CDX75970 | Canola | cytosol | 61.07 | 79.82 |
| TraesCS3A01G191900.1 | Wheat | cytosol | 83.89 | 78.62 |
| TraesCS3D01G194500.2 | Wheat | cytosol | 83.89 | 78.62 |
| Solyc06g053930.2.1 | Tomato | cytosol | 77.85 | 77.85 |
| TraesCS3A01G335000.1 | Wheat | cytosol | 93.96 | 76.92 |
| TraesCS3D01G328300.1 | Wheat | cytosol | 93.96 | 76.92 |
| HORVU3Hr1G079210.4 | Barley | cytosol | 93.96 | 76.09 |
| Zm00001d038543_P004 | Maize | plastid | 85.91 | 75.74 |
| TraesCS3B01G365900.1 | Wheat | cytosol | 92.62 | 75.41 |
| KRG89812 | Soybean | cytosol, mitochondrion | 83.22 | 75.15 |
| HORVU3Hr1G038010.1 | Barley | cytosol, plastid | 97.99 | 73.37 |
| EES01631 | Sorghum | cytosol | 86.58 | 70.11 |
| CDY30947 | Canola | cytosol | 97.99 | 69.86 |
| Zm00001d043144_P001 | Maize | plasma membrane | 83.89 | 68.31 |
| AT3G43810.2 | Thale cress | cytosol | 97.99 | 68.22 |
| HORVU2Hr1G016740.4 | Barley | cytosol | 97.99 | 67.91 |
| Os01t0810300-01 | Rice | plasma membrane | 84.56 | 67.38 |
| Solyc03g005240.1.1 | Tomato | cytosol | 68.46 | 66.67 |
| Zm00001d028948_P001 | Maize | cytosol | 87.25 | 65.99 |
| CDY57144 | Canola | cytosol | 64.43 | 65.75 |
| CDY21220 | Canola | cytosol | 97.32 | 65.61 |
| Solyc01g105630.2.1 | Tomato | cytosol | 63.76 | 64.63 |
| TraesCS5D01G068100.1 | Wheat | cytosol | 68.46 | 62.58 |
| GSMUA_Achr10P... | Banana | cytosol | 79.19 | 62.43 |
| GSMUA_Achr10P... | Banana | cytosol | 78.52 | 62.23 |
| Zm00001d041430_P001 | Maize | cytosol | 70.47 | 62.13 |
| TraesCS5A01G057100.1 | Wheat | cytosol | 68.46 | 61.82 |
| EES16322 | Sorghum | cytosol | 72.48 | 61.36 |
| TraesCS5A01G057200.1 | Wheat | cytosol | 67.11 | 61.35 |
| EES09201 | Sorghum | cytosol | 73.83 | 61.11 |
| TraesCS5B01G137100.1 | Wheat | cytosol | 73.83 | 61.11 |
| Os12t0603800-00 | Rice | cytosol | 67.79 | 60.84 |
| TraesCS5D01G068000.1 | Wheat | cytosol | 68.46 | 60.71 |
| HORVU5Hr1G044710.4 | Barley | cytosol | 73.15 | 60.56 |
| TraesCS5A01G139700.1 | Wheat | cytosol | 73.15 | 60.56 |
| TraesCS5D01G153400.1 | Wheat | cytosol | 73.15 | 60.56 |
| HORVU5Hr1G014070.2 | Barley | cytosol | 67.11 | 60.24 |
| TraesCS5B01G059900.1 | Wheat | cytosol | 67.79 | 60.12 |
| Zm00001d005003_P002 | Maize | cytosol | 71.14 | 58.89 |
| Zm00001d052415_P001 | Maize | cytosol | 62.42 | 58.86 |
| Solyc03g083520.2.1 | Tomato | cytosol, nucleus | 49.66 | 49.33 |
| AT2G41090.1 | Thale cress | cytosol | 63.09 | 49.21 |
| HORVU5Hr1G014060.1 | Barley | cytosol, plastid | 67.79 | 47.2 |
| Os05t0491000-01 | Rice | cytosol | 48.32 | 46.45 |
| Solyc11g072270.1.1 | Tomato | cytosol | 47.65 | 45.51 |
| TraesCS1D01G308000.1 | Wheat | cytosol | 45.64 | 45.33 |
| HORVU0Hr1G001280.1 | Barley | cytosol | 45.64 | 45.03 |
| TraesCS1A01G308700.1 | Wheat | cytosol | 45.64 | 44.74 |
| TraesCS1B01G319300.1 | Wheat | cytosol | 44.97 | 44.67 |
| Solyc03g097100.1.1 | Tomato | cytosol | 48.32 | 44.17 |
| TraesCS4B01G131100.1 | Wheat | cytosol | 67.11 | 43.29 |
| Zm00001d010649_P001 | Maize | extracellular | 40.94 | 42.96 |
| TraesCS4D01G126100.1 | Wheat | cytosol | 68.46 | 42.32 |
| HORVU4Hr1G026290.3 | Barley | cytosol, plastid | 62.42 | 42.08 |
| OQU78227 | Sorghum | cytosol | 48.32 | 40.22 |
| Solyc02g090810.2.1 | Tomato | cytosol, mitochondrion | 44.3 | 39.29 |
| Solyc04g026350.2.1 | Tomato | cytosol | 44.97 | 38.73 |
| Solyc01g010020.2.1 | Tomato | cytosol | 38.26 | 35.4 |
| Solyc03g114420.1.1 | Tomato | cytosol | 37.58 | 32.75 |
| GSMUA_Achr8P05790_001 | Banana | cytosol | 45.64 | 27.76 |
| AT2G41100.1 | Thale cress | cytosol | 59.06 | 27.16 |
Protein Annotations
| EnsemblPlants:Solyc01g008950.2.1 | EnsemblPlantsGene:Solyc01g008950.2 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 | PANTHER:PTHR23050:SF250 |
| PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI00000AB675 |
| UniProt:K4AT91 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:2960056..2963201
Molecular Weight (calculated)
16848.6 Da
IEP (calculated)
3.876
GRAVY (calculated)
-0.619
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MADQLTEDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYD EFVKVMMAK
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYD EFVKVMMAK
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMANH VWECASKLIK KRKKKKKKKK KKKTKNAKRN EKELIQHNPS QPESHRVPSR
201: LNLLCHRSHS CSIL
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMANH VWECASKLIK KRKKKKKKKK KKKTKNAKRN EKELIQHNPS QPESHRVPSR
201: LNLLCHRSHS CSIL
Arabidopsis Description
CAM7Calmodulin 7 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPJ2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.