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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc10g081170.1.1 Tomato extracellular 82.78 100.0
VIT_08s0040g00470.t01 Wine grape cytosol 82.78 100.0
CDY48191 Canola cytosol 98.89 99.44
Os01t0267900-01 Rice cytosol 82.22 99.33
Os03t0319300-01 Rice cytosol, extracellular, nucleus 82.22 99.33
Os07t0687200-02 Rice cytosol 82.22 99.33
PGSC0003DMT400018569 Potato cytosol 82.22 99.33
PGSC0003DMT400070437 Potato cytosol 82.22 99.33
Solyc10g077010.1.1 Tomato cytosol 82.22 99.33
Solyc11g072240.1.1 Tomato cytosol 82.22 99.33
Solyc12g099990.1.1 Tomato nucleus 82.22 99.33
PGSC0003DMT400046278 Potato cytosol 42.22 98.7
VIT_06s0009g01910.t01 Wine grape cytosol 83.89 98.69
CDY04474 Canola cytosol 81.67 98.66
CDY56411 Canola cytosol 81.67 98.66
CDY65072 Canola cytosol 81.67 98.66
GSMUA_Achr10P... Banana cytosol, plasma membrane 81.67 98.66
GSMUA_Achr3P09330_001 Banana cytosol 81.67 98.66
GSMUA_Achr5P07820_001 Banana cytosol 81.67 98.66
GSMUA_Achr6P23670_001 Banana cytosol 81.67 98.66
KRG94975 Soybean nucleus 81.67 98.66
PGSC0003DMT400058435 Potato cytosol 81.67 98.66
Solyc01g008950.2.1 Tomato nucleus 81.67 98.66
CDX92401 Canola cytosol 73.33 98.51
GSMUA_Achr5P27590_001 Banana cytosol 63.33 98.28
GSMUA_Achr10P... Banana cytosol 81.11 97.99
GSMUA_Achr2P01120_001 Banana cytosol 81.11 97.99
GSMUA_Achr3P25040_001 Banana cytosol 81.11 97.99
GSMUA_Achr6P15990_001 Banana cytosol 81.11 97.99
GSMUA_Achr9P17280_001 Banana cytosol 81.11 97.99
Os01t0279300-01 Rice cytosol, plasma membrane, plastid 81.11 97.99
Os05t0491100-01 Rice cytosol, extracellular 81.11 97.99
Zm00001d008278_P001 Maize cytosol 68.89 97.64
CDY55678 Canola cytosol 80.56 97.32
CDY12321 Canola cytosol 78.33 97.24
GSMUA_Achr11P... Banana cytosol 55.0 97.06
CDX96148 Canola cytosol 80.0 96.64
PGSC0003DMT400054299 Potato cytosol 60.56 96.46
TraesCS1A01G308800.1 Wheat cytosol 70.0 96.18
CDY27651 Canola cytosol 79.44 95.33
CDX99690 Canola cytosol 78.89 95.3
AT2G27030.3 Thale cress cytosol 91.11 90.61
TraesCS3A01G184500.1 Wheat cytosol 82.22 90.24
KRH18664 Soybean cytosol 70.0 90.0
TraesCS3D01G188600.1 Wheat cytosol 82.78 89.22
Zm00001d038545_P001 Maize cytosol, mitochondrion 71.67 86.58
PGSC0003DMT400014123 Potato mitochondrion 58.33 86.07
Zm00001d047597_P001 Maize cytosol 70.0 85.71
TraesCS2B01G113800.2 Wheat cytosol 82.22 84.57
TraesCS3B01G219900.1 Wheat cytosol 80.56 83.33
CDX75970 Canola cytosol 51.11 80.7
TraesCS3A01G335000.1 Wheat cytosol 80.0 79.12
TraesCS3D01G328300.1 Wheat cytosol 80.0 79.12
TraesCS3A01G191900.1 Wheat cytosol 68.89 77.99
TraesCS3D01G194500.2 Wheat cytosol 68.89 77.99
HORVU3Hr1G079210.4 Barley cytosol 79.44 77.72
Zm00001d038543_P004 Maize plastid 71.67 76.33
TraesCS3B01G365900.1 Wheat cytosol 77.22 75.96
KRG89812 Soybean cytosol, mitochondrion 69.44 75.76
HORVU3Hr1G038010.1 Barley cytosol, plastid 82.22 74.37
PGSC0003DMT400097662 Potato cytosol, mitochondrion 70.56 73.41
EES01631 Sorghum cytosol 74.44 72.83
CDY30947 Canola cytosol 84.44 72.73
CDX92965 Canola cytosol 61.67 72.08
CDY34215 Canola cytosol 62.22 71.79
CDY10686 Canola cytosol 61.67 71.61
CDX94883 Canola cytosol 43.89 71.17
Os01t0810300-01 Rice plasma membrane 73.33 70.59
Zm00001d043144_P001 Maize plasma membrane 71.67 70.49
HORVU2Hr1G016740.4 Barley cytosol 83.33 69.77
CDY21220 Canola cytosol 83.89 68.33
CDY10325 Canola cytosol 42.78 68.14
CDY06478 Canola cytosol 56.11 66.89
GSMUA_Achr10P... Banana cytosol 70.0 66.67
Zm00001d028948_P001 Maize cytosol 72.78 66.5
CDY57144 Canola cytosol 53.89 66.44
GSMUA_Achr10P... Banana cytosol 68.33 65.43
EES09201 Sorghum cytosol 65.0 65.0
TraesCS5B01G137100.1 Wheat cytosol 63.33 63.33
Zm00001d052415_P001 Maize cytosol 55.56 63.29
HORVU5Hr1G044710.4 Barley cytosol 62.78 62.78
TraesCS5A01G139700.1 Wheat cytosol 62.78 62.78
TraesCS5D01G153400.1 Wheat cytosol 62.78 62.78
CDY40824 Canola cytosol 62.22 62.22
Zm00001d005003_P002 Maize cytosol 62.22 62.22
Zm00001d041430_P001 Maize cytosol 58.33 62.13
TraesCS5D01G068100.1 Wheat cytosol 56.11 61.96
EES16322 Sorghum cytosol 60.0 61.36
TraesCS5A01G057100.1 Wheat cytosol 56.11 61.21
HORVU5Hr1G014070.2 Barley cytosol 56.11 60.84
TraesCS5A01G057200.1 Wheat cytosol 55.0 60.74
Os12t0603800-00 Rice cytosol 55.56 60.24
TraesCS5D01G068000.1 Wheat cytosol 56.11 60.12
TraesCS5B01G059900.1 Wheat cytosol 55.56 59.52
CDX98074 Canola cytosol 40.56 49.32
CDY21044 Canola cytosol 40.56 49.32
CDY30070 Canola cytosol 40.56 49.32
CDY31259 Canola cytosol 40.56 49.32
CDY26556 Canola cytosol 40.0 48.65
CDY15991 Canola cytosol 39.44 47.97
HORVU5Hr1G014060.1 Barley cytosol, plastid 55.56 46.73
Os05t0491000-01 Rice cytosol 40.0 46.45
TraesCS1D01G308000.1 Wheat cytosol 37.78 45.33
HORVU0Hr1G001280.1 Barley cytosol 37.78 45.03
TraesCS4B01G131100.1 Wheat cytosol 57.78 45.02
TraesCS1A01G308700.1 Wheat cytosol 37.78 44.74
TraesCS1B01G319300.1 Wheat cytosol 37.22 44.67
TraesCS4D01G126100.1 Wheat cytosol 58.89 43.98
Zm00001d010649_P001 Maize extracellular 33.89 42.96
HORVU4Hr1G026290.3 Barley cytosol, plastid 51.67 42.08
OQU78227 Sorghum cytosol 40.0 40.22
CDY54677 Canola cytosol 36.67 39.76
CDY61824 Canola cytosol 36.67 39.76
CDY58544 Canola cytosol 37.22 39.65
CDX75623 Canola extracellular 36.67 36.67
CDY26151 Canola cytosol 31.67 36.31
CDY04172 Canola cytosol 32.22 36.02
CDY59874 Canola cytosol 32.22 36.02
CDX81878 Canola cytosol 31.11 35.9
CDY21702 Canola cytosol 31.11 35.9
CDY48076 Canola cytosol 32.22 35.8
CDY51605 Canola cytosol 32.22 35.8
CDY19221 Canola cytosol 31.11 35.67
CDX83123 Canola golgi 37.22 35.08
CDY62753 Canola cytosol 37.78 34.0
GSMUA_Achr8P05790_001 Banana cytosol 38.33 28.16
Protein Annotations
EnsemblPlants:CDX77060EnsemblPlantsGene:GSBRNA2T00127633001Gene3D:1.10.238.10GO:A0A078CJL3GO:GO:0003674GO:GO:0005488
GO:GO:0005509InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domInterPro:IPR002048PANTHER:PTHR23050
PANTHER:PTHR23050:SF250PFAM:PF13499PFscan:PS50222ProteinID:CDX77060ProteinID:CDX77060.1ScanProsite:PS00018
SEG:segSMART:SM00054SUPFAM:SSF47473UniParc:UPI0004EE3943MapMan:35.1:
Description
BnaC04g38550D
Coordinates
chrLK031809:+:810941..812810
Molecular Weight (calculated)
20656.2 Da
IEP (calculated)
4.454
GRAVY (calculated)
-0.880
Length
180 amino acids
Sequence
(BLAST)
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMAKR RRKRSMAGNP SSSTERKEER RRRKSHCRIL
Best Arabidopsis Sequence Match ( AT2G27030.3 )
(BLAST)
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAKR RGKRVMAAKR SSNSAEYKEK NGRRKSHCRI L
Arabidopsis Description
CAM5Calmodulin 5 [Source:UniProtKB/TrEMBL;Acc:F4IVN6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.