CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX68763
CDX72118
CDX72310
CDX74175
CDX80000
CDX84824
CDX86205
CDX87823
CDX89558
CDX92626
CDX97806
CDY03470
CDY05601
CDY10749
CDY10996
CDY13441
CDY20325
CDY23304
CDY23988
CDY29658
CDY33884
CDY34269
CDY36432
CDY38936
CDY40667
CDY41890
CDY42022
CDY43913
CDY45583
CDY47130
CDY48658
CDY50747
CDY56774
CDY60852

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G56800.1	CDX87823	AT1G51500.1	15299147
AT3G56800.1	CDY43913	AT1G51500.1	15299147
AT3G56800.1	CDX89558	AT2G23320.1	15733871
AT3G56800.1	CDY38936	AT2G23320.1	15733871
AT3G56800.1	CDY20325	AT2G24570.1	15733871
AT3G56800.1	CDY45583	AT2G24570.1	15733871
AT3G56800.1	CDX84824	AT2G30590.1	15733871
AT3G56800.1	CDX97806	AT2G30590.1	15733871
AT3G56800.1	CDY10749	AT2G30590.1	15733871
AT3G56800.1	CDY23988	AT2G30590.1	15733871
AT3G56800.1	CDY29658	AT2G30590.1	15733871
AT3G56800.1	CDY47130	AT2G30590.1	15733871
AT3G56800.1	CDX80000	AT2G46240.1	16003391
AT3G56800.1	CDY42022	AT2G46240.1	16003391
AT3G56800.1	CDX74175	AT3G04670.1	15733871
AT3G56800.1	CDY40667	AT3G04670.1	15733871
AT3G56800.1	CDY41890	AT3G04670.1	15733871
AT3G56800.1	CDY50747	AT3G04670.1	15733871
AT3G56800.1	CDX72118	AT3G56690.1	11346951
AT3G56800.1	CDY56774	AT3G56690.1	11346951
AT3G56800.1	CDX92626	AT4G24240.1	15733871
AT3G56800.1	CDY03470	AT4G24240.1	15733871
AT3G56800.1	CDY10996	AT4G24240.1	15733871
AT3G56800.1	CDY34269	AT4G24240.1	15733871
AT3G56800.1	CDX68763	AT4G31550.1	15733871
AT3G56800.1	CDX72310	AT4G31550.1	15733871
AT3G56800.1	CDY13441	AT4G31550.1	15733871
AT3G56800.1	CDY23304	AT4G31550.1	15733871
AT3G56800.1	CDY36432	AT4G31550.1	15733871
AT3G56800.1	CDY60852	AT4G31550.1	15733871
AT3G56800.1	CDX86205	AT5G28650.1	15733871
AT3G56800.1	CDY05601	AT5G28650.1	15733871
AT3G56800.1	CDY33884	AT5G28650.1	15733871
AT3G56800.1	CDY48658	AT5G28650.1	15733871

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G56800.1	Thale cress	cytosol	99.33	99.33
PGSC0003DMT400018569	Potato	cytosol	99.33	99.33
PGSC0003DMT400070437	Potato	cytosol	99.33	99.33
Solyc10g077010.1.1	Tomato	cytosol	99.33	99.33
Solyc11g072240.1.1	Tomato	cytosol	99.33	99.33
Solyc12g099990.1.1	Tomato	nucleus	99.33	99.33
PGSC0003DMT400046278	Potato	cytosol	51.01	98.7
Bra007269.1-P	Field mustard	cytosol	98.66	98.66
CDY04474	Canola	cytosol	98.66	98.66
CDY56411	Canola	cytosol	98.66	98.66
PGSC0003DMT400058435	Potato	cytosol	98.66	98.66
Solyc01g008950.2.1	Tomato	nucleus	98.66	98.66
Solyc10g081170.1.1	Tomato	extracellular	98.66	98.66
VIT_08s0040g00470.t01	Wine grape	cytosol	98.66	98.66
CDX92401	Canola	cytosol	88.59	98.51
GSMUA_Achr5P27590_001	Banana	cytosol	76.51	98.28
GSMUA_Achr10P...	Banana	cytosol	97.99	97.99
GSMUA_Achr6P15990_001	Banana	cytosol	97.99	97.99
GSMUA_Achr9P17280_001	Banana	cytosol	97.99	97.99
Os01t0267900-01	Rice	cytosol	97.99	97.99
Os01t0279300-01	Rice	cytosol, plasma membrane, plastid	97.99	97.99
Os03t0319300-01	Rice	cytosol, extracellular, nucleus	97.99	97.99
Os07t0687200-02	Rice	cytosol	97.99	97.99
GSMUA_Achr10P...	Banana	cytosol, plasma membrane	97.32	97.32
GSMUA_Achr3P09330_001	Banana	cytosol	97.32	97.32
GSMUA_Achr5P07820_001	Banana	cytosol	97.32	97.32
GSMUA_Achr6P23670_001	Banana	cytosol	97.32	97.32
KRG94975	Soybean	nucleus	97.32	97.32
CDY12321	Canola	cytosol	94.63	97.24
GSMUA_Achr2P01120_001	Banana	cytosol	96.64	96.64
GSMUA_Achr3P25040_001	Banana	cytosol	96.64	96.64
Os05t0491100-01	Rice	cytosol, extracellular	96.64	96.64
PGSC0003DMT400054299	Potato	cytosol	73.15	96.46
VIT_06s0009g01910.t01	Wine grape	cytosol	98.66	96.08
Zm00001d008278_P001	Maize	cytosol	81.88	96.06
CDY55678	Canola	cytosol	95.97	95.97
CDX96148	Canola	cytosol	95.3	95.3
GSMUA_Achr11P...	Banana	cytosol	65.1	95.1
TraesCS1A01G308800.1	Wheat	cytosol	83.22	94.66
CDY27651	Canola	cytosol	94.63	94.0
CDX99690	Canola	cytosol	93.96	93.96
KRH18664	Soybean	cytosol	83.22	88.57
TraesCS3A01G184500.1	Wheat	cytosol	97.32	88.41
TraesCS3D01G188600.1	Wheat	cytosol	97.99	87.43
Zm00001d038545_P001	Maize	cytosol, mitochondrion	85.23	85.23
PGSC0003DMT400014123	Potato	mitochondrion	69.13	84.43
Zm00001d047597_P001	Maize	cytosol	83.22	84.35
TraesCS2B01G113800.2	Wheat	cytosol	97.99	83.43
TraesCS3B01G219900.1	Wheat	cytosol	97.32	83.33
CDY48191	Canola	cytosol	98.66	82.12
CDX77060	Canola	cytosol	98.66	81.67
CDX75970	Canola	cytosol	60.4	78.95
TraesCS3A01G191900.1	Wheat	cytosol	83.22	77.99
TraesCS3D01G194500.2	Wheat	cytosol	83.22	77.99
TraesCS3A01G335000.1	Wheat	cytosol	92.62	75.82
TraesCS3D01G328300.1	Wheat	cytosol	92.62	75.82
Zm00001d038543_P004	Maize	plastid	85.23	75.15
HORVU3Hr1G079210.4	Barley	cytosol	92.62	75.0
KRG89812	Soybean	cytosol, mitochondrion	82.55	74.55
TraesCS3B01G365900.1	Wheat	cytosol	91.28	74.32
PGSC0003DMT400097662	Potato	cytosol, mitochondrion	85.23	73.41
CDX92965	Canola	cytosol	75.84	73.38
HORVU3Hr1G038010.1	Barley	cytosol, plastid	97.99	73.37
CDY34215	Canola	cytosol	76.51	73.08
CDY10686	Canola	cytosol	75.84	72.9
CDX94883	Canola	cytosol	53.02	71.17
CDY30947	Canola	cytosol	97.99	69.86
EES01631	Sorghum	cytosol	85.23	69.02
CDY06478	Canola	cytosol	69.13	68.21
CDY10325	Canola	cytosol	51.68	68.14
HORVU2Hr1G016740.4	Barley	cytosol	97.99	67.91
Zm00001d043144_P001	Maize	plasma membrane	82.55	67.21
Os01t0810300-01	Rice	plasma membrane	83.89	66.84
CDY57144	Canola	cytosol	65.1	66.44
CDY21220	Canola	cytosol	97.32	65.61
Zm00001d028948_P001	Maize	cytosol	86.58	65.48
CDY40824	Canola	cytosol	76.51	63.33
TraesCS5D01G068100.1	Wheat	cytosol	68.46	62.58
GSMUA_Achr10P...	Banana	cytosol	78.52	62.23
GSMUA_Achr10P...	Banana	cytosol	78.52	61.9
TraesCS5A01G057100.1	Wheat	cytosol	68.46	61.82
Zm00001d041430_P001	Maize	cytosol	69.8	61.54
TraesCS5A01G057200.1	Wheat	cytosol	67.11	61.35
TraesCS5B01G137100.1	Wheat	cytosol	73.83	61.11
EES16322	Sorghum	cytosol	71.81	60.8
TraesCS5D01G068000.1	Wheat	cytosol	68.46	60.71
EES09201	Sorghum	cytosol	73.15	60.56
HORVU5Hr1G044710.4	Barley	cytosol	73.15	60.56
TraesCS5A01G139700.1	Wheat	cytosol	73.15	60.56
TraesCS5D01G153400.1	Wheat	cytosol	73.15	60.56
HORVU5Hr1G014070.2	Barley	cytosol	67.11	60.24
Os12t0603800-00	Rice	cytosol	67.11	60.24
TraesCS5B01G059900.1	Wheat	cytosol	67.79	60.12
Zm00001d005003_P002	Maize	cytosol	70.47	58.33
Zm00001d052415_P001	Maize	cytosol	61.74	58.23
CDX98074	Canola	cytosol	48.99	49.32
CDY21044	Canola	cytosol	48.99	49.32
CDY30070	Canola	cytosol	48.99	49.32
CDY31259	Canola	cytosol	48.99	49.32
CDY26556	Canola	cytosol	48.32	48.65
CDY15991	Canola	cytosol	47.65	47.97
HORVU5Hr1G014060.1	Barley	cytosol, plastid	67.79	47.2
Os05t0491000-01	Rice	cytosol	47.65	45.81
TraesCS1D01G308000.1	Wheat	cytosol	44.97	44.67
HORVU0Hr1G001280.1	Barley	cytosol	44.97	44.37
TraesCS1A01G308700.1	Wheat	cytosol	44.97	44.08
TraesCS1B01G319300.1	Wheat	cytosol	44.3	44.0
TraesCS4B01G131100.1	Wheat	cytosol	66.44	42.86
Zm00001d010649_P001	Maize	extracellular	40.27	42.25
TraesCS4D01G126100.1	Wheat	cytosol	67.79	41.91
HORVU4Hr1G026290.3	Barley	cytosol, plastid	61.74	41.63
CDY54677	Canola	cytosol	44.3	39.76
CDY61824	Canola	cytosol	44.3	39.76
OQU78227	Sorghum	cytosol	47.65	39.66
CDY58544	Canola	cytosol	44.3	39.05
CDX81878	Canola	cytosol	38.26	36.54
CDY21702	Canola	cytosol	38.26	36.54
CDY26151	Canola	cytosol	38.26	36.31
CDX75623	Canola	extracellular	43.62	36.11
CDY59874	Canola	cytosol	38.93	36.02
CDY19221	Canola	cytosol	37.58	35.67
CDY04172	Canola	cytosol	38.26	35.4
CDY48076	Canola	cytosol	38.26	35.19
CDY51605	Canola	cytosol	38.26	35.19
CDX83123	Canola	golgi	44.3	34.55
CDY62753	Canola	cytosol	44.97	33.5
GSMUA_Achr8P05790_001	Banana	cytosol	46.31	28.16

Protein Annotations

EnsemblPlants:CDY65072	EnsemblPlantsGene:GSBRNA2T00044130001	Gene3D:1.10.238.10	GO:A0A078JI54	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR23050
PANTHER:PTHR23050:SF250	PFAM:PF13499	PFscan:PS50222	ProteinID:CDY65072	ProteinID:CDY65072.1	ScanProsite:PS00018
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0004EB344A	UniProt:A0A078JI54	MapMan:35.1	:

Description

BnaCnng45820DBnaCnng45820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JI54]

Coordinates

chrLK034649:+:16416..17669

Molecular Weight (calculated)

16806.6 Da

IEP (calculated)

3.871

GRAVY (calculated)

-0.615

Length

149 amino acids

Sequence
(BLAST)

001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYD EFVKVMMAK

Best Arabidopsis Sequence Match ( AT2G27030.1 )
(BLAST)

001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK

Arabidopsis Description

CAM5Calmodulin 5 [Source:UniProtKB/TrEMBL;Acc:F4IVN6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.