Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45583 | Canola | nucleus | 96.11 | 83.69 |
| Bra032084.1-P | Field mustard | nucleus | 95.76 | 83.38 |
| AT2G24570.1 | Thale cress | nucleus | 84.1 | 74.14 |
| CDX72310 | Canola | nucleus | 72.79 | 72.54 |
| CDY13441 | Canola | nucleus | 73.5 | 70.99 |
| CDY36432 | Canola | nucleus | 69.61 | 69.86 |
| CDY60852 | Canola | nucleus | 70.67 | 67.11 |
| CDX68763 | Canola | nucleus | 69.96 | 66.44 |
| CDY23304 | Canola | nucleus | 70.32 | 65.03 |
| GSMUA_Achr7P15930_001 | Banana | nucleus | 58.3 | 58.51 |
| GSMUA_Achr5P21910_001 | Banana | nucleus | 51.94 | 57.65 |
| GSMUA_Achr10P... | Banana | nucleus | 52.65 | 55.81 |
| VIT_11s0052g00450.t01 | Wine grape | nucleus | 48.06 | 55.51 |
| VIT_04s0069g00920.t01 | Wine grape | nucleus | 66.08 | 55.33 |
| GSMUA_Achr3P05670_001 | Banana | nucleus | 53.71 | 55.07 |
| PGSC0003DMT400075531 | Potato | nucleus | 59.36 | 53.85 |
| GSMUA_Achr9P22950_001 | Banana | nucleus | 51.59 | 51.96 |
| GSMUA_Achr5P04870_001 | Banana | nucleus | 54.42 | 51.68 |
| TraesCS2D01G269200.1 | Wheat | nucleus | 56.89 | 51.44 |
| Os04t0287400-01 | Rice | nucleus | 58.3 | 50.61 |
| GSMUA_Achr6P03810_001 | Banana | nucleus | 45.94 | 50.58 |
| TraesCS2A01G270200.2 | Wheat | nucleus | 56.89 | 50.31 |
| GSMUA_Achr4P20600_001 | Banana | nucleus | 49.82 | 50.0 |
| KRH02746 | Soybean | nucleus | 56.54 | 50.0 |
| Zm00001d004086_P001 | Maize | nucleus | 57.6 | 49.24 |
| GSMUA_Achr3P00510_001 | Banana | nucleus | 45.94 | 49.24 |
| KRH19120 | Soybean | nucleus | 56.18 | 49.07 |
| TraesCS2B01G454300.1 | Wheat | nucleus | 53.71 | 48.56 |
| Os04t0605100-01 | Rice | nucleus | 53.0 | 48.54 |
| Zm00001d002405_P001 | Maize | nucleus | 50.18 | 47.65 |
| PGSC0003DMT400024632 | Potato | nucleus | 56.18 | 47.6 |
| GSMUA_Achr1P23560_001 | Banana | nucleus | 50.88 | 47.52 |
| Zm00001d026252_P001 | Maize | nucleus | 53.0 | 47.47 |
| EES11384 | Sorghum | nucleus | 52.65 | 47.3 |
| TraesCS2D01G431000.1 | Wheat | nucleus | 54.06 | 47.22 |
| Solyc08g006320.2.1 | Tomato | nucleus | 54.42 | 46.95 |
| TraesCS2A01G433000.1 | Wheat | nucleus | 54.06 | 46.65 |
| Solyc12g096350.1.1 | Tomato | nucleus | 55.12 | 46.15 |
| TraesCS5B01G375100.1 | Wheat | nucleus | 47.35 | 44.82 |
| TraesCS5A01G060200.1 | Wheat | nucleus | 45.94 | 44.07 |
| TraesCS5D01G382600.1 | Wheat | nucleus | 46.64 | 44.0 |
| TraesCS5D01G071800.1 | Wheat | nucleus | 45.94 | 43.92 |
| HORVU4Hr1G012580.5 | Barley | nucleus, plastid | 23.67 | 43.79 |
| TraesCS5B01G067700.1 | Wheat | nucleus | 45.94 | 43.62 |
| TraesCS5A01G373100.1 | Wheat | nucleus | 45.23 | 42.95 |
| GSMUA_Achr3P27880_001 | Banana | nucleus | 41.7 | 42.91 |
| HORVU5Hr1G092770.2 | Barley | mitochondrion | 45.23 | 42.81 |
| Zm00001d050195_P001 | Maize | nucleus | 44.17 | 40.85 |
| Zm00001d024376_P001 | Maize | nucleus | 44.88 | 40.84 |
| Os08t0235800-00 | Rice | nucleus | 49.12 | 40.41 |
| Os02t0462800-01 | Rice | nucleus | 36.04 | 40.32 |
| HORVU5Hr1G015120.1 | Barley | nucleus | 42.76 | 40.07 |
| CDX89558 | Canola | nucleus | 41.7 | 39.6 |
| EES14755 | Sorghum | nucleus | 44.17 | 39.31 |
| CDY38936 | Canola | nucleus | 41.7 | 38.82 |
| OQU84894 | Sorghum | nucleus | 39.93 | 37.79 |
| CDY03470 | Canola | nucleus | 44.52 | 37.28 |
| CDY50747 | Canola | nucleus | 39.22 | 36.63 |
| HORVU5Hr1G122800.4 | Barley | plastid | 32.86 | 36.05 |
| CDY41890 | Canola | nucleus | 39.58 | 35.78 |
| CDX92626 | Canola | nucleus | 43.82 | 35.63 |
| CDY40667 | Canola | nucleus | 39.93 | 35.53 |
| CDX74175 | Canola | nucleus | 40.28 | 35.51 |
| CDY10996 | Canola | nucleus | 43.11 | 35.16 |
| Zm00001d016457_P001 | Maize | nucleus | 37.81 | 32.92 |
| CDY29658 | Canola | nucleus | 37.46 | 32.92 |
| CDY48658 | Canola | nucleus | 38.16 | 32.05 |
| CDX86205 | Canola | nucleus | 38.52 | 31.96 |
| CDX97806 | Canola | nucleus | 37.1 | 31.82 |
| CDY05601 | Canola | nucleus | 37.81 | 31.75 |
| CDY33884 | Canola | nucleus | 37.81 | 31.75 |
| CDY10749 | Canola | nucleus | 37.46 | 31.74 |
| CDY34269 | Canola | nucleus | 44.52 | 31.42 |
| CDX84824 | Canola | nucleus | 37.46 | 31.36 |
| CDY47130 | Canola | nucleus | 37.81 | 31.2 |
| CDY23988 | Canola | nucleus | 37.46 | 31.18 |
| HORVU5Hr1G052630.2 | Barley | plastid | 26.86 | 30.16 |
| HORVU3Hr1G097420.1 | Barley | nucleus | 31.45 | 27.9 |
| CDX71933 | Canola | nucleus | 17.67 | 25.13 |
| HORVU3Hr1G039500.1 | Barley | plastid | 27.92 | 24.92 |
| CDY07185 | Canola | nucleus | 21.2 | 20.55 |
| CDY69417 | Canola | nucleus | 16.61 | 20.35 |
| CDX90180 | Canola | nucleus | 18.73 | 20.31 |
| CDY01962 | Canola | nucleus | 20.85 | 20.27 |
| CDY48511 | Canola | nucleus | 21.2 | 20.13 |
| CDX99806 | Canola | nucleus | 18.37 | 19.92 |
| CDY50779 | Canola | nucleus | 18.37 | 19.85 |
| CDY49246 | Canola | nucleus | 18.02 | 18.82 |
| CDY10943 | Canola | nucleus | 19.79 | 18.73 |
| CDX89000 | Canola | nucleus | 18.37 | 18.64 |
| CDY00583 | Canola | nucleus | 18.37 | 18.64 |
| CDX94201 | Canola | nucleus | 19.43 | 18.39 |
| CDY59336 | Canola | nucleus | 19.08 | 18.24 |
| CDX76334 | Canola | nucleus | 19.79 | 18.18 |
| CDY41375 | Canola | nucleus | 19.79 | 18.18 |
| CDY44115 | Canola | nucleus | 18.73 | 17.91 |
| CDY27045 | Canola | nucleus | 19.79 | 16.28 |
| CDX96157 | Canola | nucleus | 19.79 | 16.09 |
| CDY52525 | Canola | nucleus | 22.61 | 15.35 |
| CDX77581 | Canola | nucleus | 20.49 | 15.34 |
| CDX98217 | Canola | nucleus | 20.49 | 15.06 |
| CDY43651 | Canola | nucleus | 21.91 | 14.9 |
| CDY09551 | Canola | nucleus | 21.55 | 14.77 |
| CDY72268 | Canola | cytosol, plastid | 0.71 | 1.94 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078G193 | UniProt:A0A078G193 | EnsemblPlants:CDY20325 | ProteinID:CDY20325 |
| ProteinID:CDY20325.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00012263001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFAM:PF10533 | PFscan:PS50811 |
| PANTHER:PTHR31282 | PANTHER:PTHR31282:SF15 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE5ED7 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | InterPro:Zn-cluster-dom | SEG:seg | : | : | : |
Description
BnaC04g36310DBnaC04g36310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G193]
Coordinates
chrLK032105:-:612680..614323
Molecular Weight (calculated)
30689.4 Da
IEP (calculated)
10.498
GRAVY (calculated)
-0.587
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVDIMRFPK MEDQTAIQEA ASQGLKSMEH LISVLSKRPK DHNADCSEIT DFTVSKFKKV ISLLNRTGHA RFRRGPVQSS PSSSSSSAAA PPLPPASHPT
101: PPSQLSPPAP QSLTLDFTRP TFAKESFSVS SNSSFMSSAI TGDGSVSKGS SIFLAPAPTA PHDHSQNFSG KISGSGSGKC HCKKSRKNRM KRSVRVPAIS
201: AKIADIPADE YSWRKYGQKP IKGSPHPRGY YKCSTFRGCP ARKHVERALD DPTMLIVTYE GEHRHQKSAM NENISSSLVF GSA
101: PPSQLSPPAP QSLTLDFTRP TFAKESFSVS SNSSFMSSAI TGDGSVSKGS SIFLAPAPTA PHDHSQNFSG KISGSGSGKC HCKKSRKNRM KRSVRVPAIS
201: AKIADIPADE YSWRKYGQKP IKGSPHPRGY YKCSTFRGCP ARKHVERALD DPTMLIVTYE GEHRHQKSAM NENISSSLVF GSA
001: MAVELMTRNY ISGVGADSFA VQEAAASGLK SIENFIGLMS RDSFNSDQPS SSSASASASA AADLESARNT TADAAVSKFK RVISLLDRTR TGHARFRRAP
101: VHVISPVLLQ EEPKTTPFQS PLPPPPQMIR KGSFSSSMKT IDFSSLSSVT TESDNQKKIH HHQRPSETAP FASQTQSLST TVSSFSKSTK RKCNSENLLT
201: GKCASASSSG RCHCSKKRKI KQRRIIRVPA ISAKMSDVPP DDYSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERA ADDSSMLIVT YEGDHNHSLS
301: AADLAGAAVA DLILESS
101: VHVISPVLLQ EEPKTTPFQS PLPPPPQMIR KGSFSSSMKT IDFSSLSSVT TESDNQKKIH HHQRPSETAP FASQTQSLST TVSSFSKSTK RKCNSENLLT
201: GKCASASSSG RCHCSKKRKI KQRRIIRVPA ISAKMSDVPP DDYSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERA ADDSSMLIVT YEGDHNHSLS
301: AADLAGAAVA DLILESS
Arabidopsis Description
WRKY15Probable WRKY transcription factor 15 [Source:UniProtKB/Swiss-Prot;Acc:O22176]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.