Factsheet for Zm00001d004086_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d014037_P004
Zm00001d028948_P001
Zm00001d032708_P009
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24570.1	Zm00001d005003_P002	AT3G56800.1	15733871
AT2G24570.1	Zm00001d008278_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d010649_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d028948_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d038543_P004	AT3G56800.1	15733871
AT2G24570.1	Zm00001d038545_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d041430_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d043144_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d047597_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d052415_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d014037_P004	AT5G28900.1	21798944
AT2G24570.1	Zm00001d032708_P009	AT5G28900.1	21798944
AT4G31550.1	Zm00001d005003_P002	AT3G56800.1	15733871
AT4G31550.1	Zm00001d008278_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d010649_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d028948_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d038543_P004	AT3G56800.1	15733871
AT4G31550.1	Zm00001d038545_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d041430_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d043144_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d047597_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d052415_P001	AT3G56800.1	15733871

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0287400-01	Rice	nucleus	77.34	78.53
TraesCS2D01G269200.1	Wheat	nucleus	72.21	76.36
TraesCS2A01G270200.2	Wheat	nucleus	72.21	74.69
GSMUA_Achr7P15930_001	Banana	nucleus	53.17	62.41
GSMUA_Achr5P21910_001	Banana	nucleus	46.53	60.39
GSMUA_Achr10P...	Banana	nucleus	48.04	59.55
CDY20325	Canola	nucleus	49.24	57.6
Zm00001d002405_P001	Maize	nucleus	50.45	56.04
CDX72310	Canola	nucleus	47.73	55.63
CDY60852	Canola	nucleus	48.34	53.69
CDY36432	Canola	nucleus	45.62	53.55
Zm00001d026252_P001	Maize	nucleus	51.06	53.48
CDY13441	Canola	nucleus	47.13	53.24
CDX68763	Canola	nucleus	47.43	52.68
Bra011282.1-P	Field mustard	nucleus	51.06	52.48
AT2G24570.1	Thale cress	nucleus	50.15	51.71
AT4G31550.1	Thale cress	nucleus	50.45	51.38
CDY23304	Canola	nucleus	47.43	51.31
Bra032084.1-P	Field mustard	nucleus	49.55	50.46
CDY45583	Canola	nucleus	49.24	50.15
Bra023998.1-P	Field mustard	nucleus	49.24	49.7
Bra010231.1-P	Field mustard	nucleus	49.24	49.1
PGSC0003DMT400024632	Potato	nucleus	48.34	47.9
Solyc08g006320.2.1	Tomato	nucleus	47.43	47.87
PGSC0003DMT400075531	Potato	nucleus	45.02	47.76
Zm00001d050195_P001	Maize	nucleus	39.58	42.81
Solyc12g096350.1.1	Tomato	nucleus	43.5	42.6
Zm00001d024376_P001	Maize	nucleus	39.27	41.8
Zm00001d016457_P001	Maize	nucleus	38.97	39.69
Zm00001d030969_P001	Maize	nucleus	36.56	32.35
Zm00001d033291_P007	Maize	nucleus	33.84	31.64
Zm00001d041397_P001	Maize	nucleus	34.74	31.34
Zm00001d013709_P003	Maize	nucleus	34.44	30.89
Zm00001d013307_P003	Maize	nucleus	33.23	27.85
Zm00001d033965_P001	Maize	nucleus	32.93	27.46
Zm00001d037054_P001	Maize	nucleus	16.92	22.31
Zm00001d044171_P001	Maize	nucleus	19.94	19.13
Zm00001d012746_P001	Maize	nucleus	15.71	18.77
Zm00001d011403_P001	Maize	nucleus	19.64	18.62
Zm00001d043474_P001	Maize	nucleus	16.92	18.3
Zm00001d043569_P001	Maize	cytosol	15.71	18.12
Zm00001d008578_P001	Maize	nucleus	18.43	17.89
Zm00001d053369_P001	Maize	nucleus	19.94	17.89
Zm00001d009698_P001	Maize	nucleus	18.43	17.58
Zm00001d016052_P001	Maize	nucleus	19.34	16.71
Zm00001d034888_P001	Maize	nucleus	18.73	16.32
Zm00001d030139_P001	Maize	nucleus	18.73	14.09
Zm00001d051550_P001	Maize	nucleus	19.34	13.73
Zm00001d002452_P001	Maize	nucleus	20.54	13.47
Zm00001d017712_P001	Maize	nucleus	19.34	13.22
Zm00001d034475_P001	Maize	cytosol	12.08	12.31
Zm00001d026218_P001	Maize	nucleus	13.29	10.07

Protein Annotations

EntrezGene:100274230	MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:B4FZP1	EMBL:BT042579	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003682	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719
GO:GO:0009737	GO:GO:0009739	GO:GO:0009938	GO:GO:0009987	GO:GO:0043565	GO:GO:1990841
InterPro:IPR003657	InterPro:IPR036576	ProteinID:ONM18295.1	PFAM:PF03106	PFAM:PF10533	PFscan:PS50811
PANTHER:PTHR31282	PANTHER:PTHR31282:SF15	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI00017B8121	InterPro:WRKY_dom
InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d004086	EnsemblPlants:Zm00001d004086_P001	EnsemblPlants:Zm00001d004086_T001	InterPro:Zn-cluster-dom	SEG:seg

Description

WRKY-transcription factor 105Probable WRKY transcription factor 11

Coordinates

chr2:-:81414319..81415921

Molecular Weight (calculated)

35385.9 Da

IEP (calculated)

10.383

GRAVY (calculated)

-0.656

Length

331 amino acids

Sequence
(BLAST)

001: MTTLDLMGGY GRVDEQVAIQ EAATAGLRGM ERLILQLSQA GTGERSLSPP AVQAQRQQQK QLEQIQQQVD CRELTDMTVS KFKKVISILN RTGHARFRRG
101: PVAARSQSQS QGPASPEPAQ SAPAPAARPL TLDFTKSVSG YSRDSGFSVS GASSSFLSSV TTGDGSVSNG RAGGSSFLMF PPAPGAASCA KPPPAGAAQK
201: RKCHDHAHSE NVAGGKYGAN GGRCHCSKRR KHRVKRTIRV PAISPKVADI PADEYSWRKY GQKPIKGSPY PRGYYKCSTV RGCPARKHVE RDPADPSMLI
301: VTYEGEHRHS PASGQDPPPP SLAPLPELPS H

Best Arabidopsis Sequence Match ( AT4G31550.1 )
(BLAST)

001: MAVDLMRFPK IDDQTAIQEA ASQGLQSMEH LIRVLSNRPE QQHNVDCSEI TDFTVSKFKT VISLLNRTGH ARFRRGPVHS TSSAASQKLQ SQIVKNTQPE
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA

Arabidopsis Description

WRKY11Probable WRKY transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV15]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.