Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032084.1-P | Field mustard | nucleus | 96.62 | 96.62 |
| CDY20325 | Canola | nucleus | 83.69 | 96.11 |
| AT2G24570.1 | Thale cress | nucleus | 82.77 | 83.8 |
| CDY60852 | Canola | nucleus | 68.0 | 74.16 |
| CDX68763 | Canola | nucleus | 67.69 | 73.83 |
| CDX72310 | Canola | nucleus | 64.31 | 73.59 |
| CDY13441 | Canola | nucleus | 65.23 | 72.35 |
| CDY36432 | Canola | nucleus | 62.77 | 72.34 |
| CDY23304 | Canola | nucleus | 68.0 | 72.22 |
| GSMUA_Achr7P15930_001 | Banana | nucleus | 52.92 | 60.99 |
| VIT_04s0069g00920.t01 | Wine grape | nucleus | 61.23 | 58.88 |
| GSMUA_Achr10P... | Banana | nucleus | 48.31 | 58.8 |
| VIT_11s0052g00450.t01 | Wine grape | nucleus | 44.0 | 58.37 |
| GSMUA_Achr3P05670_001 | Banana | nucleus | 49.54 | 58.33 |
| GSMUA_Achr5P21910_001 | Banana | nucleus | 45.23 | 57.65 |
| PGSC0003DMT400075531 | Potato | nucleus | 54.46 | 56.73 |
| GSMUA_Achr9P22950_001 | Banana | nucleus | 47.38 | 54.8 |
| GSMUA_Achr5P04870_001 | Banana | nucleus | 50.15 | 54.7 |
| KRH02746 | Soybean | nucleus | 52.31 | 53.12 |
| KRH19120 | Soybean | nucleus | 52.62 | 52.78 |
| TraesCS2D01G269200.1 | Wheat | nucleus | 50.46 | 52.4 |
| GSMUA_Achr3P00510_001 | Banana | nucleus | 42.46 | 52.27 |
| Os04t0605100-01 | Rice | nucleus | 49.23 | 51.78 |
| TraesCS2B01G454300.1 | Wheat | nucleus | 49.54 | 51.44 |
| GSMUA_Achr4P20600_001 | Banana | nucleus | 44.62 | 51.42 |
| TraesCS2A01G270200.2 | Wheat | nucleus | 50.46 | 51.25 |
| Os04t0287400-01 | Rice | nucleus | 51.38 | 51.23 |
| Zm00001d002405_P001 | Maize | nucleus | 46.77 | 51.01 |
| Zm00001d026252_P001 | Maize | nucleus | 49.23 | 50.63 |
| GSMUA_Achr6P03810_001 | Banana | nucleus | 40.0 | 50.58 |
| GSMUA_Achr1P23560_001 | Banana | nucleus | 47.08 | 50.49 |
| EES11384 | Sorghum | nucleus | 48.62 | 50.16 |
| TraesCS2D01G431000.1 | Wheat | nucleus | 49.85 | 50.0 |
| TraesCS2A01G433000.1 | Wheat | nucleus | 49.85 | 49.39 |
| Zm00001d004086_P001 | Maize | nucleus | 50.15 | 49.24 |
| Solyc12g096350.1.1 | Tomato | nucleus | 51.08 | 49.11 |
| PGSC0003DMT400024632 | Potato | nucleus | 50.46 | 49.1 |
| Solyc08g006320.2.1 | Tomato | nucleus | 49.54 | 49.09 |
| HORVU4Hr1G012580.5 | Barley | nucleus, plastid | 22.77 | 48.37 |
| TraesCS5D01G071800.1 | Wheat | nucleus | 42.15 | 46.28 |
| TraesCS5B01G375100.1 | Wheat | nucleus | 42.46 | 46.15 |
| TraesCS5A01G060200.1 | Wheat | nucleus | 41.85 | 46.1 |
| TraesCS5D01G382600.1 | Wheat | nucleus | 42.15 | 45.67 |
| TraesCS5B01G067700.1 | Wheat | nucleus | 41.85 | 45.64 |
| HORVU5Hr1G092770.2 | Barley | mitochondrion | 41.54 | 45.15 |
| GSMUA_Achr3P27880_001 | Banana | nucleus | 38.15 | 45.09 |
| TraesCS5A01G373100.1 | Wheat | nucleus | 41.23 | 44.97 |
| Os08t0235800-00 | Rice | nucleus | 46.15 | 43.6 |
| Zm00001d024376_P001 | Maize | nucleus | 40.92 | 42.77 |
| Zm00001d050195_P001 | Maize | nucleus | 40.0 | 42.48 |
| HORVU5Hr1G015120.1 | Barley | nucleus | 38.77 | 41.72 |
| EES14755 | Sorghum | nucleus | 40.31 | 41.2 |
| Os02t0462800-01 | Rice | nucleus | 32.0 | 41.11 |
| CDX89558 | Canola | nucleus | 37.23 | 40.6 |
| CDY38936 | Canola | nucleus | 37.23 | 39.8 |
| HORVU5Hr1G122800.4 | Barley | plastid | 31.08 | 39.15 |
| OQU84894 | Sorghum | nucleus | 36.0 | 39.13 |
| CDY03470 | Canola | nucleus | 40.62 | 39.05 |
| CDY50747 | Canola | nucleus | 35.69 | 38.28 |
| CDY41890 | Canola | nucleus | 36.0 | 37.38 |
| CDY40667 | Canola | nucleus | 36.31 | 37.11 |
| CDX74175 | Canola | nucleus | 36.62 | 37.07 |
| CDX92626 | Canola | nucleus | 39.69 | 37.07 |
| CDY10996 | Canola | nucleus | 39.08 | 36.6 |
| Zm00001d016457_P001 | Maize | nucleus | 35.08 | 35.08 |
| CDY29658 | Canola | nucleus | 33.54 | 33.85 |
| CDY05601 | Canola | nucleus | 34.77 | 33.53 |
| CDY33884 | Canola | nucleus | 34.77 | 33.53 |
| CDY48658 | Canola | nucleus | 34.77 | 33.53 |
| CDX86205 | Canola | nucleus | 35.08 | 33.43 |
| CDX97806 | Canola | nucleus | 33.54 | 33.03 |
| HORVU5Hr1G052630.2 | Barley | plastid | 25.54 | 32.94 |
| CDY34269 | Canola | nucleus | 40.62 | 32.92 |
| CDX84824 | Canola | nucleus | 34.15 | 32.84 |
| CDY23988 | Canola | nucleus | 34.15 | 32.65 |
| CDY10749 | Canola | nucleus | 33.54 | 32.63 |
| CDY47130 | Canola | nucleus | 34.15 | 32.36 |
| HORVU3Hr1G097420.1 | Barley | nucleus | 28.92 | 29.47 |
| HORVU3Hr1G039500.1 | Barley | plastid | 26.77 | 27.44 |
| CDX71933 | Canola | nucleus | 16.31 | 26.63 |
| CDY07185 | Canola | nucleus | 19.08 | 21.23 |
| CDY01962 | Canola | nucleus | 18.77 | 20.96 |
| CDY48511 | Canola | nucleus | 19.08 | 20.81 |
| CDY69417 | Canola | nucleus | 14.77 | 20.78 |
| CDX90180 | Canola | nucleus | 16.62 | 20.69 |
| CDX99806 | Canola | nucleus | 16.62 | 20.69 |
| CDY50779 | Canola | nucleus | 16.62 | 20.61 |
| CDY49246 | Canola | nucleus | 16.62 | 19.93 |
| CDY10943 | Canola | nucleus | 18.15 | 19.73 |
| CDX89000 | Canola | nucleus | 16.92 | 19.71 |
| CDY00583 | Canola | nucleus | 16.92 | 19.71 |
| CDX76334 | Canola | nucleus | 18.15 | 19.16 |
| CDY41375 | Canola | nucleus | 18.15 | 19.16 |
| CDX94201 | Canola | nucleus | 17.54 | 19.06 |
| CDY44115 | Canola | nucleus | 17.23 | 18.92 |
| CDY59336 | Canola | nucleus | 17.23 | 18.92 |
| CDY27045 | Canola | nucleus | 18.46 | 17.44 |
| CDX96157 | Canola | nucleus | 18.15 | 16.95 |
| CDX77581 | Canola | nucleus | 19.38 | 16.67 |
| CDX98217 | Canola | nucleus | 19.38 | 16.36 |
| CDY52525 | Canola | nucleus | 20.92 | 16.31 |
| CDY43651 | Canola | nucleus | 20.31 | 15.87 |
| CDY09551 | Canola | nucleus | 20.0 | 15.74 |
| CDY72268 | Canola | cytosol, plastid | 0.62 | 1.94 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078I8X5 | UniProt:A0A078I8X5 | EnsemblPlants:CDY45583 | ProteinID:CDY45583 |
| ProteinID:CDY45583.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00082306001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFAM:PF10533 | PFscan:PS50811 |
| PANTHER:PTHR31282 | PANTHER:PTHR31282:SF15 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EF2B2A | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | InterPro:Zn-cluster-dom | SEG:seg | : | : | : |
Description
BnaA04g14500DBnaA04g14500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I8X5]
Coordinates
chrLK032629:-:18524..20013
Molecular Weight (calculated)
35221.9 Da
IEP (calculated)
10.323
GRAVY (calculated)
-0.503
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVDIMRFPK MEDQTAIQEA ASQGLKSMEH LISVLSNRPK DHNADCSEIT DFTVSKFKKV ISLLNRTGHA RFRRGPVQSP PSSSSSSAAS PPLPPVSHQT
101: PPSQLSPPAP VITPGSFVQS HPQSLTLDFT GPTVFGAKTK STEIVEFAKE CFSVSSNSSF MSSAITGDGS VSKGSSIFLA PAPVASSGKP PLAGLPYRKR
201: CFEHDHSQNF SGKISGSGSG KCHCKKSRKN RMKRSVRVPA ISAKIADIPV DEYSWRKYGQ KPIKGSPHPR GYYKCSTFRG CPARKHVERA LDDPTMLVVT
301: YEGEHRHQKS AMNENISSSL VFGSA
101: PPSQLSPPAP VITPGSFVQS HPQSLTLDFT GPTVFGAKTK STEIVEFAKE CFSVSSNSSF MSSAITGDGS VSKGSSIFLA PAPVASSGKP PLAGLPYRKR
201: CFEHDHSQNF SGKISGSGSG KCHCKKSRKN RMKRSVRVPA ISAKIADIPV DEYSWRKYGQ KPIKGSPHPR GYYKCSTFRG CPARKHVERA LDDPTMLVVT
301: YEGEHRHQKS AMNENISSSL VFGSA
001: MTVDIMRLPK MEDQTAIQEA ASQGLKSMEH LIRVLSNRPE ERNVDCSEIT DFTVSKFKKV ISLLNRSGHA RFRRGPVHSP PSSSVPPPVK VTTPAPTQIS
101: APAPVSFVQA NQQSVTLDFT RPSVFGAKTK SSEVVEFAKE SFSVSSNSSF MSSAITGDGS VSKGSSIFLA PAPAVPVTSS GKPPLSGLPY RKRCFEHDHS
201: EGFSGKISGS GNGKCHCKKS RKNRMKRTVR VPAVSAKIAD IPPDEYSWRK YGQKPIKGSP HPRGYYKCST FRGCPARKHV ERALDDSTML IVTYEGEHRH
301: HQSTMQEHVT PSVSGLVFGS A
101: APAPVSFVQA NQQSVTLDFT RPSVFGAKTK SSEVVEFAKE SFSVSSNSSF MSSAITGDGS VSKGSSIFLA PAPAVPVTSS GKPPLSGLPY RKRCFEHDHS
201: EGFSGKISGS GNGKCHCKKS RKNRMKRTVR VPAVSAKIAD IPPDEYSWRK YGQKPIKGSP HPRGYYKCST FRGCPARKHV ERALDDSTML IVTYEGEHRH
301: HQSTMQEHVT PSVSGLVFGS A
Arabidopsis Description
WRKY17Uncharacterized protein At2g24570 [Source:UniProtKB/TrEMBL;Acc:Q0WTF3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.