Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021934.1-P | Field mustard | nucleus | 92.79 | 97.47 |
| CDY69417 | Canola | nucleus | 47.36 | 85.28 |
| CDY52525 | Canola | nucleus | 79.09 | 78.9 |
| CDX77581 | Canola | nucleus | 43.03 | 47.35 |
| CDX98217 | Canola | nucleus | 43.27 | 46.75 |
| CDY09551 | Canola | nucleus | 45.19 | 45.52 |
| Solyc02g021680.2.1 | Tomato | nucleus | 37.98 | 41.47 |
| HORVU2Hr1G102740.3 | Barley | nucleus | 29.33 | 39.1 |
| PGSC0003DMT400039061 | Potato | nucleus | 38.46 | 38.74 |
| CDX71933 | Canola | nucleus | 17.31 | 36.18 |
| Os04t0597300-01 | Rice | nucleus | 35.82 | 35.99 |
| GSMUA_Achr9P03020_001 | Banana | nucleus | 34.62 | 35.04 |
| TraesCS6D01G247200.1 | Wheat | nucleus | 38.94 | 33.68 |
| TraesCS6A01G267500.1 | Wheat | nucleus | 38.94 | 33.68 |
| TraesCS6B01G294900.1 | Wheat | nucleus | 38.7 | 33.33 |
| Os02t0698800-01 | Rice | nucleus | 40.14 | 33.0 |
| CDY10943 | Canola | nucleus | 23.56 | 32.78 |
| EES07413 | Sorghum | nucleus | 38.46 | 32.19 |
| TraesCS2B01G465000.1 | Wheat | nucleus | 38.94 | 32.14 |
| KXG27029 | Sorghum | nucleus | 38.94 | 32.08 |
| Zm00001d017712_P001 | Maize | nucleus | 37.26 | 32.02 |
| Zm00001d051550_P001 | Maize | nucleus | 35.82 | 31.97 |
| TraesCS2D01G443000.1 | Wheat | nucleus | 38.94 | 31.83 |
| CDY41375 | Canola | nucleus | 23.56 | 31.82 |
| CDY59336 | Canola | nucleus | 22.6 | 31.76 |
| TraesCS2A01G443800.1 | Wheat | nucleus | 38.7 | 31.63 |
| Zm00001d002452_P001 | Maize | nucleus | 38.22 | 31.49 |
| CDX76334 | Canola | nucleus | 23.08 | 31.17 |
| CDY44115 | Canola | nucleus | 22.12 | 31.08 |
| CDX94201 | Canola | nucleus | 22.12 | 30.77 |
| CDX99806 | Canola | nucleus | 19.23 | 30.65 |
| CDY50779 | Canola | nucleus | 19.23 | 30.53 |
| CDX90180 | Canola | nucleus | 18.99 | 30.27 |
| CDY01962 | Canola | nucleus | 20.91 | 29.9 |
| CDY07185 | Canola | nucleus | 20.91 | 29.79 |
| CDY48511 | Canola | nucleus | 21.15 | 29.53 |
| Zm00001d026218_P001 | Maize | nucleus | 30.29 | 28.83 |
| CDY49246 | Canola | nucleus | 18.51 | 28.41 |
| CDY00583 | Canola | nucleus | 18.75 | 27.96 |
| CDX89000 | Canola | nucleus | 18.75 | 27.96 |
| CDY27045 | Canola | nucleus | 19.47 | 23.55 |
| CDX96157 | Canola | nucleus | 19.47 | 23.28 |
| CDY60852 | Canola | nucleus | 16.35 | 22.82 |
| CDX68763 | Canola | nucleus | 16.35 | 22.82 |
| CDY72268 | Canola | cytosol, plastid | 5.53 | 22.33 |
| CDY13441 | Canola | nucleus | 15.62 | 22.18 |
| CDY36432 | Canola | nucleus | 14.9 | 21.99 |
| HORVU6Hr1G067680.3 | Barley | nucleus | 29.57 | 21.93 |
| CDY20325 | Canola | nucleus | 14.9 | 21.91 |
| CDX72310 | Canola | nucleus | 14.9 | 21.83 |
| CDY23304 | Canola | nucleus | 15.62 | 21.24 |
| CDY45583 | Canola | nucleus | 15.87 | 20.31 |
| CDX89558 | Canola | nucleus | 13.94 | 19.46 |
| CDY38936 | Canola | nucleus | 14.18 | 19.41 |
| CDY50747 | Canola | nucleus | 13.46 | 18.48 |
| CDY40667 | Canola | nucleus | 13.7 | 17.92 |
| CDY41890 | Canola | nucleus | 13.46 | 17.89 |
| CDX74175 | Canola | nucleus | 13.7 | 17.76 |
| CDX84824 | Canola | nucleus | 14.42 | 17.75 |
| CDY03470 | Canola | nucleus | 14.42 | 17.75 |
| CDY29658 | Canola | nucleus | 13.7 | 17.7 |
| CDY23988 | Canola | nucleus | 14.42 | 17.65 |
| CDY05601 | Canola | nucleus | 14.18 | 17.51 |
| CDX97806 | Canola | nucleus | 13.7 | 17.27 |
| CDY33884 | Canola | nucleus | 13.94 | 17.21 |
| CDY47130 | Canola | nucleus | 14.18 | 17.2 |
| CDY10749 | Canola | nucleus | 13.7 | 17.07 |
| CDX86205 | Canola | nucleus | 13.94 | 17.01 |
| CDY48658 | Canola | nucleus | 13.7 | 16.91 |
| CDY10996 | Canola | nucleus | 13.94 | 16.71 |
| CDX92626 | Canola | nucleus | 13.94 | 16.67 |
| CDY34269 | Canola | nucleus | 14.18 | 14.71 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078I1H8 | UniProt:A0A078I1H8 | EnsemblPlants:CDY43651 | ProteinID:CDY43651 |
| ProteinID:CDY43651.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00076996001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 |
| PANTHER:PTHR32096:SF18 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE3A9A | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA04g20400DBnaA04g20400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I1H8]
Coordinates
chrLK032564:+:57189..59873
Molecular Weight (calculated)
45367.4 Da
IEP (calculated)
5.261
GRAVY (calculated)
-0.623
Length
416 amino acids
Sequence
(BLAST)
(BLAST)
001: MCSVFESLDM DNFQGDLTDV VRGLGSGHMT SSPGPPEGPF AINFHVDFPS VANSQMNPFG DPFVSMTDPL LSLPANFSGA GDSKSNNSFA VFPNTTVDDH
101: VKNQCSVFPR IRISQRNIIQ DASKCNSPAM ATSSVTAASP WGMINVDSPN SPRNCLLVDN NNITSSSSQI QISSCPQNFG ITRRKGQGKK VVCIPAPAAA
201: SSRSSGEIVP SDLWAWRKYG QKPIKGSPYP RGYYRCSSSK GCPARKQVER SRTDPNMLVI TYTSEHNHPW PTQRNALAGS TRSSSSSSSN PCSKSTIATT
301: SALSRVSQNK EEPNRSHLPF SSTPPPYVAK AVKEEDAEER KDNMEFDDVD DTYRPEFQHQ LGDFFADLDE LEEDSLTMLL PQGFSGDNSG GGNLDNKRMI
401: PDVFSDFFDD DSPRSL
101: VKNQCSVFPR IRISQRNIIQ DASKCNSPAM ATSSVTAASP WGMINVDSPN SPRNCLLVDN NNITSSSSQI QISSCPQNFG ITRRKGQGKK VVCIPAPAAA
201: SSRSSGEIVP SDLWAWRKYG QKPIKGSPYP RGYYRCSSSK GCPARKQVER SRTDPNMLVI TYTSEHNHPW PTQRNALAGS TRSSSSSSSN PCSKSTIATT
301: SALSRVSQNK EEPNRSHLPF SSTPPPYVAK AVKEEDAEER KDNMEFDDVD DTYRPEFQHQ LGDFFADLDE LEEDSLTMLL PQGFSGDNSG GGNLDNKRMI
401: PDVFSDFFDD DSPRSL
001: MCSVFEFQDM DNFQGDLTDV VRGIGSGHVS PSPGPPEGPS PSSMSPPPTS DLHVEFPSAA TSASCLANPF GDPFVSMKDP LIHLPASYIS GAGDNKSNKS
101: FAIFPKIFED DHIKSQCSVF PRIKISQSNN IHDASTCNSP AITVSSAAVA ASPWGMINVN TTNSPRNCLL VDNNNNTSSC SQVQISSSPR NLGIKRRKSQ
201: AKKVVCIPAP AAMNSRSSGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM LVITYTSEHN HPWPTQRNAL AGSTRSSSSS
301: SLNPSSKSST AAATTSPSSR VFQNNSSKDE PNNSNLPSSS THPPFDAAAI KEENVEERQE KMEFDYNDVE NTYRPELLQE FQHQPEDFFA DLDELEGDSL
401: TMLLSHSSGG GNMENKTTIP DVFSDFFDDD ESSRSL
101: FAIFPKIFED DHIKSQCSVF PRIKISQSNN IHDASTCNSP AITVSSAAVA ASPWGMINVN TTNSPRNCLL VDNNNNTSSC SQVQISSSPR NLGIKRRKSQ
201: AKKVVCIPAP AAMNSRSSGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM LVITYTSEHN HPWPTQRNAL AGSTRSSSSS
301: SLNPSSKSST AAATTSPSSR VFQNNSSKDE PNNSNLPSSS THPPFDAAAI KEENVEERQE KMEFDYNDVE NTYRPELLQE FQHQPEDFFA DLDELEGDSL
401: TMLLSHSSGG GNMENKTTIP DVFSDFFDDD ESSRSL
Arabidopsis Description
WRKY35WRKY DNA-binding protein 35 [Source:TAIR;Acc:AT2G34830]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.