Factsheet for TraesCS2D01G443000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G465000.1	Wheat	nucleus	96.86	97.82
TraesCS2A01G443800.1	Wheat	nucleus	96.86	96.86
HORVU2Hr1G102740.3	Barley	nucleus	56.19	91.67
Os04t0597300-01	Rice	nucleus	62.67	77.05
KXG27029	Sorghum	nucleus	73.08	73.66
Zm00001d002452_P001	Maize	nucleus	69.35	69.9
Zm00001d026218_P001	Maize	nucleus	58.35	67.96
VIT_10s0003g05740.t01	Wine grape	nucleus, plastid	33.2	54.17
GSMUA_Achr5P03670_001	Banana	nucleus	35.76	53.69
GSMUA_Achr4P27420_001	Banana	nucleus	37.72	52.32
TraesCS6D01G247200.1	Wheat	nucleus	48.53	51.35
CDY69417	Canola	nucleus	23.18	51.08
Solyc02g021680.2.1	Tomato	nucleus	34.18	45.67
PGSC0003DMT400039061	Potato	nucleus	34.97	43.1
TraesCS1D01G200900.1	Wheat	nucleus	27.31	40.88
GSMUA_Achr2P09710_001	Banana	nucleus	37.33	40.77
Bra005388.1-P	Field mustard	nucleus	31.83	40.2
Bra041029.1-P	Field mustard	nucleus	32.02	40.05
CDY09551	Canola	nucleus	32.22	39.71
AT2G34830.2	Thale cress	nucleus	33.79	39.45
CDY43651	Canola	nucleus	31.83	38.94
CDY52525	Canola	nucleus	31.83	38.85
KRH36880	Soybean	nucleus	38.51	38.13
KRH11863	Soybean	nucleus	38.9	37.86
Bra021934.1-P	Field mustard	nucleus	29.27	37.63
KRH42254	Soybean	nucleus	30.65	36.36
KRH58373	Soybean	nucleus	30.45	36.05
TraesCS5D01G564500.2	Wheat	nucleus	24.95	34.7
TraesCS3D01G289500.1	Wheat	nucleus	16.9	30.61
TraesCS3D01G227400.1	Wheat	nucleus	19.06	30.31
TraesCS3D01G281900.1	Wheat	nucleus, plastid	16.31	27.85
TraesCS1D01G431600.1	Wheat	nucleus	16.11	27.8
TraesCS4D01G320200.1	Wheat	nucleus	14.73	26.79
TraesCS4D01G320000.1	Wheat	nucleus	14.54	24.83
TraesCS7D01G336400.1	Wheat	nucleus	16.9	24.16
TraesCS5D01G071800.1	Wheat	nucleus	13.56	23.31
TraesCS5D01G382600.1	Wheat	nucleus	13.16	22.33
TraesCS2D01G431000.1	Wheat	nucleus	13.75	21.6
TraesCS4D01G068200.1	Wheat	nucleus	13.75	20.53
TraesCS2D01G269200.1	Wheat	nucleus	12.57	20.45
TraesCS5D01G070700.1	Wheat	nucleus	12.97	18.54
TraesCS5D01G390800.1	Wheat	nucleus	12.57	16.24
TraesCS5D01G451000.1	Wheat	nucleus	11.59	12.27

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF49	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS2D01G443000
EnsemblPlants:TraesCS2D01G443000.1	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chr2D:-:553729233..553733187

Molecular Weight (calculated)

53384.3 Da

IEP (calculated)

6.442

GRAVY (calculated)

-0.630

Length

509 amino acids

Sequence
(BLAST)

001: MCDYFLQRME GDQAGGGDLT DIVRAGGAMP GNNDGDGTNL PSTAAEWQLQ PADQPMLFPP PPPPSASPGT GADVFGDPFA GLGDPFSSDY SSGAPEFLDG
101: MPDAMAKIGF EAGPGGGVNG CGGGGGGGGG QMFDMSRKPL LPRGMQMMPA GIGGGMGPRL MQSSLSPIAI RPYPAMTAGD MVKLGITPGQ AAGCAIDAAI
201: GGMQMSSSPR NNNSGIKRRK NQARKVVCIP APTTAGSRPT GEVVPSDLWA WRKYGQKPIK GSPHPRGYYR CSSSKGCSAR KQVERSRTDP NMLVITYTSE
301: HNHPWPTQRN ALAGSTRSHH GKNGGGGGSG SGSKSSHNEK QTQNQNVKEE RKDHRAAATT TATTTTSTVT TTASTSPVVV KEETLAGSSS EAQARDQRAM
401: DTVTGVLQQV DHRELMDQVF SESYRPMIPG SGQHHEDFFA DFADLAELES DPMSLIFSKE YMEARPSGGA SDHGGQEKAV AKELDPFDML DWSTTSSTAG
501: STFEQGKRG

Best Arabidopsis Sequence Match ( AT2G34830.2 )
(BLAST)

001: MCSVFEFQDM DNFQGDLTDV VRGIGSGHVS PSPGPPEGPS PSSMSPPPTS DLHVEFPSAA TSASCLANPF GDPFVSMKDP LIHLPASYIS GAGDNKSNKS
101: FAIFPKIFED DHIKSQCSVF PRIKISQSNN IHDASTCNSP AITVSSAAVA ASPWGMINVN TTNSPRNCLL VDNNNNTSSC SQVQISSSPR NLGIKRRKSQ
201: AKKVVCIPAP AAMNSRSSGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM LVITYTSEHN HPWPTQRNAL AGSTRSSSSS
301: SLNPSSKSST AAATTSPSSR VFQNNSSKDE PNNSNLPSSS THPPFDAAAI KEENVEERQE KMEFDYNDVE NTYRPELLQE FQHQPEDFFA DLDELEGDSL
401: TMLLSHSSGG GNMENKTTIP DVFSDFFDDD ESSRSL

Arabidopsis Description

WRKY35WRKY DNA-binding protein 35 [Source:TAIR;Acc:AT2G34830]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.