Factsheet for Bra005388.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69417	Canola	nucleus	57.32	100.0
Bra021934.1-P	Field mustard	nucleus	76.43	77.78
Bra026228.1-P	Field mustard	nucleus	48.39	49.24
Bra041029.1-P	Field mustard	nucleus	46.9	46.44
Solyc02g021680.2.1	Tomato	nucleus	39.95	42.26
HORVU2Hr1G102740.3	Barley	nucleus	31.02	40.06
PGSC0003DMT400039061	Potato	nucleus	39.21	38.26
Bra013779.1-P	Field mustard	nucleus	13.4	37.76
Os04t0597300-01	Rice	nucleus	37.22	36.23
GSMUA_Achr9P03020_001	Banana	nucleus	35.48	34.79
TraesCS6A01G267500.1	Wheat	nucleus	39.95	33.47
TraesCS6D01G247200.1	Wheat	nucleus	39.95	33.47
Os02t0698800-01	Rice	nucleus	41.69	33.2
TraesCS6B01G294900.1	Wheat	nucleus	39.7	33.13
TraesCS2B01G465000.1	Wheat	nucleus	40.45	32.34
KXG27029	Sorghum	nucleus	40.2	32.08
TraesCS2D01G443000.1	Wheat	nucleus	40.2	31.83
Zm00001d017712_P001	Maize	nucleus	38.21	31.82
Bra019297.1-P	Field mustard	nucleus	23.57	31.77
TraesCS2A01G443800.1	Wheat	nucleus	39.95	31.63
Zm00001d051550_P001	Maize	nucleus	36.48	31.55
Zm00001d002452_P001	Maize	nucleus	39.45	31.49
EES07413	Sorghum	nucleus	38.71	31.39
Bra032300.1-P	Field mustard	nucleus	20.35	31.3
Bra010839.1-P	Field mustard	nucleus	20.1	31.03
Bra037368.1-P	Field mustard	nucleus	22.83	30.87
Bra020814.1-P	Field mustard	nucleus	23.57	30.84
Bra013708.1-P	Field mustard	nucleus	21.84	29.73
Bra007413.1-P	Field mustard	nucleus	19.85	29.63
Zm00001d026218_P001	Maize	nucleus	31.51	29.06
Bra014556.1-P	Field mustard	nucleus	19.85	28.78
Bra022612.1-P	Field mustard	nucleus	20.84	24.42
HORVU6Hr1G067680.3	Barley	nucleus	31.02	22.28
Bra011282.1-P	Field mustard	nucleus	17.37	21.74
Bra023998.1-P	Field mustard	nucleus	16.87	20.73
Bra040396.1-P	Field mustard	nucleus	15.38	20.46
Bra032174.1-P	Field mustard	nucleus	15.88	20.06
Bra032084.1-P	Field mustard	nucleus	16.13	20.0
Bra001117.1-P	Field mustard	nucleus	15.14	19.12
Bra021652.1-P	Field mustard	nucleus	15.14	19.0
Bra010231.1-P	Field mustard	nucleus	15.63	18.98
Bra022808.1-P	Field mustard	nucleus	15.63	18.64
Bra018303.1-P	Field mustard	nucleus	15.38	18.51
Bra019239.1-P	Field mustard	nucleus	15.63	18.1
Bra020617.1-P	Field mustard	nucleus	15.14	18.1
Bra010005.1-P	Field mustard	nucleus	15.14	17.89

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra005388	EnsemblPlants:Bra005388.1	EnsemblPlants:Bra005388.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4CMF0	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF18	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0002547F37	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT2G34830 (E=4e-122) WRKY35, MEE24, AtWRKY35 | WRKY35 (WRKY DNA-binding protein 35); transcription factor

Coordinates

chrA05:+:5155344..5157950

Molecular Weight (calculated)

43425.0 Da

IEP (calculated)

5.988

GRAVY (calculated)

-0.622

Length

403 amino acids

Sequence
(BLAST)

001: MDNFQGDLTD VVRGIGSGHV SSSTGPSPSS LSPPPISDVP SVASCQINPF GDPFVSMADP LFNLTANKSN NSFEVFPEVS EDDHIKSKCS VFPRIQISQS
101: NIIQDASKCS SPAMAVSSAV AAASPWGMIN VVSTNSPRNC SMVDNSNNTS SSSQIQISSS PRNLGIKKRK GQGKKVVCIP APAAINSRSS GEVVPSDLWA
201: WRKYGQKPIK GSPYPRGYYR CSSSKGCPAR KQVERSRTDP NMLVITYTSE HNHPWPTQRN ALAGSTRSSI SSSSNPSSKS LTSIATATTS SSSRVSQNKD
301: EPNKSHLASS STPPSPYVAA AVKEEDVEER QNKMEFDNDP DNTYRPEFQH QPEGFFADLD ELEEDSLTML LSQGFSGGGN LENKTTIPDV FSDFFDDDSS
401: RSL

Best Arabidopsis Sequence Match ( AT2G34830.2 )
(BLAST)

001: MCSVFEFQDM DNFQGDLTDV VRGIGSGHVS PSPGPPEGPS PSSMSPPPTS DLHVEFPSAA TSASCLANPF GDPFVSMKDP LIHLPASYIS GAGDNKSNKS
101: FAIFPKIFED DHIKSQCSVF PRIKISQSNN IHDASTCNSP AITVSSAAVA ASPWGMINVN TTNSPRNCLL VDNNNNTSSC SQVQISSSPR NLGIKRRKSQ
201: AKKVVCIPAP AAMNSRSSGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM LVITYTSEHN HPWPTQRNAL AGSTRSSSSS
301: SLNPSSKSST AAATTSPSSR VFQNNSSKDE PNNSNLPSSS THPPFDAAAI KEENVEERQE KMEFDYNDVE NTYRPELLQE FQHQPEDFFA DLDELEGDSL
401: TMLLSHSSGG GNMENKTTIP DVFSDFFDDD ESSRSL

Arabidopsis Description

WRKY35WRKY DNA-binding protein 35 [Source:TAIR;Acc:AT2G34830]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.