Factsheet for Bra010839.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

nucleus: 28594365

gfp PMID: 28594365 doi

ZQ Fan, XL Tan, W Shan, JF Kuang, WJ Lu, JY Chen

State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources/Guangdong Provincial Key Laboratory of Postharvest Science of Fruits and Vegetables/Key Laboratory of Biology and Genetic Improvement of Horticultural Crops-South China, Ministry of Agriculture, College of Horticulture, South China Agricultural University, Guangzhou 510642, China. chenjianye@scau.edu.cn., State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources/Guangdong Provincial Key Laboratory of Postharvest Science of Fruits and Vegetables/Key Laboratory of Biology and Genetic Improvement of Horticultural Crops-South China, Ministry of Agriculture, College of Horticulture, South China Agricultural University, Guangzhou 510642, China. ffanzqi@163.com., State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources/Guangdong Provincial Key Laboratory of Postharvest Science of Fruits and Vegetables/Key Laboratory of Biology and Genetic Improvement of Horticultural Crops-South China, Ministry of Agriculture, College of Horticulture, South China Agricultural University, Guangzhou 510642, China. jfkuang@scau.edu.cn., State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources/Guangdong Provincial Key Laboratory of Postharvest Science of Fruits and Vegetables/Key Laboratory of Biology and Genetic Improvement of Horticultural Crops-South China, Ministry of Agriculture, College of Horticulture, South China Agricultural University, Guangzhou 510642, China. shanwei@scau.edu.cn., State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources/Guangdong Provincial Key Laboratory of Postharvest Science of Fruits and Vegetables/Key Laboratory of Biology and Genetic Improvement of Horticultural Crops-South China, Ministry of Agriculture, College of Horticulture, South China Agricultural University, Guangzhou 510642, China. tanxl2017@163.com., State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources/Guangdong Provincial Key Laboratory of Postharvest Science of Fruits and Vegetables/Key Laboratory of Biology and Genetic Improvement of Horticultural Crops-South China, Ministry of Agriculture, College of Horticulture, South China Agricultural University, Guangzhou 510642, China. wjlu@scau.edu.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90180	Canola	nucleus	99.23	99.23
AT1G29280.1	Thale cress	nucleus	90.04	90.73
Bra032300.1-P	Field mustard	nucleus	86.59	86.26
PGSC0003DMT400027378	Potato	nucleus	36.78	46.15
PGSC0003DMT400052637	Potato	nucleus	42.15	42.97
Solyc07g055280.2.1	Tomato	nucleus	42.15	40.0
Solyc10g007970.1.1	Tomato	nucleus	39.08	40.0
Bra007413.1-P	Field mustard	nucleus	40.61	39.26
Bra013779.1-P	Field mustard	nucleus	21.46	39.16
Bra014556.1-P	Field mustard	nucleus	41.38	38.85
GSMUA_Achr7P24840_001	Banana	nucleus	36.78	38.71
GSMUA_Achr8P27790_001	Banana	nucleus	35.63	38.43
GSMUA_Achr3P15690_001	Banana	nucleus	36.4	37.4
TraesCS3D01G289500.1	Wheat	nucleus	40.23	37.37
HORVU3Hr1G071750.1	Barley	nucleus	39.85	37.01
GSMUA_Achr4P08360_001	Banana	nucleus	36.4	36.82
TraesCS3B01G324400.1	Wheat	nucleus	40.23	36.46
TraesCS3A01G289700.2	Wheat	nucleus	39.85	36.24
Zm00001d012746_P001	Maize	nucleus	36.4	34.3
Zm00001d043569_P001	Maize	cytosol	36.4	33.1
Zm00001d043474_P001	Maize	nucleus	38.7	33.01
Os01t0750100-03	Rice	nucleus	39.85	32.91
EES03611	Sorghum	nucleus	38.31	32.26
GSMUA_Achr4P15540_001	Banana	nucleus	34.87	31.82
EES03563	Sorghum	plastid	38.7	31.66
HORVU3Hr1G069320.3	Barley	nucleus	36.02	31.65
TraesCS3B01G315600.1	Wheat	cytosol	36.02	31.65
TraesCS3A01G281900.1	Wheat	nucleus	36.02	31.54
TraesCS3D01G281900.1	Wheat	nucleus, plastid	36.02	31.54
Os01t0730700-01	Rice	nucleus	38.31	31.35
Bra013708.1-P	Field mustard	nucleus	26.05	22.97
Bra019297.1-P	Field mustard	nucleus	26.05	22.74
Bra037368.1-P	Field mustard	nucleus	25.67	22.48
Bra020814.1-P	Field mustard	nucleus	26.05	22.08
Bra026228.1-P	Field mustard	nucleus	30.65	20.2
Bra005388.1-P	Field mustard	nucleus	31.03	20.1
Bra041029.1-P	Field mustard	nucleus	31.03	19.9
Bra021934.1-P	Field mustard	nucleus	29.89	19.7
Bra022612.1-P	Field mustard	nucleus	25.67	19.48
Bra011282.1-P	Field mustard	nucleus	21.46	17.39
Bra032174.1-P	Field mustard	nucleus	21.07	17.24
Bra040396.1-P	Field mustard	nucleus	19.92	17.16
Bra021652.1-P	Field mustard	nucleus	21.07	17.13
Bra032084.1-P	Field mustard	nucleus	21.07	16.92
Bra022808.1-P	Field mustard	nucleus	21.46	16.57
Bra010231.1-P	Field mustard	nucleus	21.07	16.57
Bra023998.1-P	Field mustard	nucleus	20.69	16.46
Bra001117.1-P	Field mustard	nucleus	19.92	16.3
Bra018303.1-P	Field mustard	nucleus	20.69	16.12
Bra019239.1-P	Field mustard	nucleus	21.46	16.09
Bra010005.1-P	Field mustard	nucleus	19.92	15.25
Bra020617.1-P	Field mustard	nucleus	19.54	15.13

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra010839	EnsemblPlants:Bra010839.1	EnsemblPlants:Bra010839.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4D2Y6	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF19	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI00025454B0	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT1G29280 (E=9e-120) WRKY65, ATWRKY65 | WRKY65; transcription factor

Coordinates

chrA08:-:16729867..16730787

Molecular Weight (calculated)

29256.1 Da

IEP (calculated)

5.273

GRAVY (calculated)

-0.810

Length

261 amino acids

Sequence
(BLAST)

001: MKRGLDMARS YNDHESSQET GPESPNSPTF NAVISSHSPK RSRRSMEKRV VNVPMKEIEG SRHKGDTTPP SDSWAWRKYG QKPIKGSPYP RGYYRCSSTK
101: GCPARKQVER SRDDPTMIII TYTSEHNHPW PLASSSRHGP KPKPEPKPEP ELEVPEEVEL EEDGNSKLMV MGREIETTPS CIVDEFAWFS EMETTSSTIL
201: ESPIFSSEKK TAVSAAADDV GVFFPMGEED ESLFADLGEL PECSVVFRHR SSVVGSQVEI F

Best Arabidopsis Sequence Match ( AT1G29280.1 )
(BLAST)

001: MKRGLDMARS YNDHESSQET GPESPNSSTF NGMKALISSH SPKRSRRSVE KRVVNVPMKE MEGSRHKGDT TPPSDSWAWR KYGQKPIKGS PYPRGYYRCS
101: STKGCPARKQ VERSRDDPTM ILITYTSEHN HPWPLTSSTR NGPKPKPEPK PEPEPEVEPE AEEEDNKFMV LGRGIETTPS CVDEFAWFTE METTSSTILE
201: SPIFSSEKKT AVSGADDVAV FFPMGEEDES LFADLGELPE CSVVFRHRSS VVGSQVEIF

Arabidopsis Description

WRKY65WRKY65 [Source:UniProtKB/TrEMBL;Acc:A0A178W690]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.