Factsheet for Bra022612.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27045	Canola	nucleus	99.42	99.42
CDX96157	Canola	nucleus	97.97	96.84
AT5G52830.1	Thale cress	nucleus	81.4	80.46
KRH35230	Soybean	nucleus	36.63	42.42
KRG91594	Soybean	nucleus	38.08	40.81
VIT_16s0050g01480.t01	Wine grape	mitochondrion	20.35	38.46
KRH08822	Soybean	nucleus, plastid	27.62	36.97
Bra037368.1-P	Field mustard	nucleus	31.98	36.91
Bra013779.1-P	Field mustard	nucleus	15.12	36.36
KRH38335	Soybean	nucleus	37.21	34.41
Zm00001d037054_P001	Maize	nucleus	24.13	33.07
Bra013708.1-P	Field mustard	nucleus	27.62	32.09
Bra019297.1-P	Field mustard	nucleus	27.62	31.77
KRH08826	Soybean	nucleus	36.34	30.64
Bra020814.1-P	Field mustard	nucleus	27.33	30.52
Os02t0265200-01	Rice	nucleus	31.98	30.47
Zm00001d053369_P001	Maize	nucleus	32.27	30.08
Zm00001d016052_P001	Maize	nucleus	33.14	29.77
EES04883	Sorghum	nucleus	32.27	29.6
Zm00001d008578_P001	Maize	nucleus	27.33	27.57
EER89819	Sorghum	nucleus	27.03	26.57
TraesCS7B01G240000.1	Wheat	nucleus	27.03	26.27
TraesCS7A01G343000.2	Wheat	nucleus	26.74	25.84
Bra010839.1-P	Field mustard	nucleus	19.48	25.67
TraesCS7D01G336400.1	Wheat	nucleus	26.45	25.56
Bra014556.1-P	Field mustard	nucleus	19.77	24.46
Bra032300.1-P	Field mustard	nucleus	18.31	24.05
Bra007413.1-P	Field mustard	nucleus	18.6	23.7
Os06t0504900-00	Rice	nucleus	26.16	23.32
HORVU7Hr1G080950.1	Barley	nucleus, plastid	26.45	22.36
Bra026228.1-P	Field mustard	nucleus	25.0	21.72
Bra005388.1-P	Field mustard	nucleus	24.42	20.84
Bra041029.1-P	Field mustard	nucleus	24.13	20.39
Bra011282.1-P	Field mustard	nucleus	18.6	19.88
Bra023998.1-P	Field mustard	nucleus	18.6	19.51
Bra010231.1-P	Field mustard	nucleus	18.6	19.28
Bra021934.1-P	Field mustard	nucleus	21.8	18.94
Bra040396.1-P	Field mustard	nucleus	16.57	18.81
Bra032084.1-P	Field mustard	nucleus	17.73	18.77
Bra021652.1-P	Field mustard	nucleus	16.86	18.07
Bra001117.1-P	Field mustard	nucleus	16.57	17.87
Bra018303.1-P	Field mustard	nucleus	17.15	17.61
Bra022808.1-P	Field mustard	nucleus	17.15	17.46
Bra010005.1-P	Field mustard	nucleus	17.15	17.3
Bra020617.1-P	Field mustard	nucleus	16.57	16.91
Bra032174.1-P	Field mustard	nucleus	14.83	15.99
Bra019239.1-P	Field mustard	nucleus	15.7	15.52

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra022612	EnsemblPlants:Bra022612.1	EnsemblPlants:Bra022612.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006950
GO:GO:0007154	GO:GO:0007165	GO:GO:0007263	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009605	GO:GO:0009607	GO:GO:0009719	GO:GO:0009739	GO:GO:0009987	GO:GO:0042742
GO:GO:0043565	GO:GO:0044212	GO:GO:0045892	InterPro:IPR003657	InterPro:IPR036576	UniProt:M4E1G4
PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF22	SMART:SM00774	SUPFAM:SSF118290
UniParc:UPI0002546DF4	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:

Description

AT5G52830 (E=6e-110) WRKY27, ATWRKY27 | WRKY27; transcription factor

Coordinates

chrA02:-:8534010..8535240

Molecular Weight (calculated)

38232.1 Da

IEP (calculated)

5.607

GRAVY (calculated)

-0.894

Length

344 amino acids

Sequence
(BLAST)

001: MSEDWDLFAV VRSCSSSVST ATINTNSRGG DEGRANCKQH DLPPLFQHIH GDISRESSSC NELQDSCKPF LPVTTTWSSP LPPPPVVSSA PNILMKQEQG
101: LIESQDQKPP LGTRVFPPPT TISSSSSVFV FRGQRDHLLQ QQPQAPLRSR KRKNQQKRTI CHVTQENLSS DMWAWRKYGQ KPIKGSPYPR NYYRCSSSKG
201: CLARKQVERS NLDPNIFIVT YTGEHTHPRP THRNSLAGST RNKSQPVNPP PKPDHPSGQT VSGVKEEIHL SPTTPLKEND DVQGTNGEEV VNMEEDEELD
301: EEEDDDDDVD DLLIPNFSVR DRDDLFFAGN FPSWSAGSAG DGGG

Best Arabidopsis Sequence Match ( AT5G52830.1 )
(BLAST)

001: MSSEDWDLFA VVRSCSSSVS TTNSCAGHED DIGNCKQQQD PPPPPLFQAS SSCNELQDSC KPFLPVTTTT TTTWSPPPLL PPPKASSPSP NILLKQEQVL
101: LESQDQKPPL SVRVFPPSTS SSVFVFRGQR DQLLQQQSQP PLRSRKRKNQ QKRTICHVTQ ENLSSDLWAW RKYGQKPIKG SPYPRNYYRC SSSKGCLARK
201: QVERSNLDPN IFIVTYTGEH THPRPTHRNS LAGSTRNKSQ PVNPVPKPDT SPLSDTVKEE IHLSPTTPLK GNDDVQETNG DEDMVGQEVN MEEEEEEEEV
301: EEDDEEEEDD DDVDDLLIPN LAVRDRDDLF FAGSFPSWSA GSAGDGGG

Arabidopsis Description

WRKY27Probable WRKY transcription factor 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLX8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.