Factsheet for Bra037368.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48511	Canola	nucleus	98.99	98.99
CDY07185	Canola	nucleus	96.31	98.29
AT4G01250.1	Thale cress	nucleus	86.58	86.58
KRH06582	Soybean	nucleus	51.68	45.97
VIT_15s0046g02190.t01	Wine grape	nucleus	52.35	44.83
KRH40377	Soybean	nucleus	52.35	44.83
KRH00856	Soybean	nucleus	52.35	44.44
PGSC0003DMT400000215	Potato	nucleus	51.34	43.47
Solyc01g095100.2.1	Tomato	nucleus	51.68	43.38
Solyc10g011910.2.1	Tomato	nucleus	43.29	41.48
GSMUA_Achr10P...	Banana	nucleus	39.6	38.69
GSMUA_Achr10P...	Banana	nucleus	38.26	38.0
Bra013779.1-P	Field mustard	nucleus	17.11	35.66
GSMUA_Achr8P19810_001	Banana	nucleus	39.93	34.0
Bra013708.1-P	Field mustard	nucleus	32.21	32.43
Bra019297.1-P	Field mustard	nucleus	32.21	32.11
Bra022612.1-P	Field mustard	nucleus	36.91	31.98
GSMUA_Achr7P14300_001	Banana	nucleus	33.22	31.83
Bra020814.1-P	Field mustard	nucleus	32.89	31.82
Bra010839.1-P	Field mustard	nucleus	22.48	25.67
Bra032300.1-P	Field mustard	nucleus	21.81	24.81
Bra014556.1-P	Field mustard	nucleus	22.15	23.74
Bra007413.1-P	Field mustard	nucleus	21.48	23.7
Bra005388.1-P	Field mustard	nucleus	30.87	22.83
Bra026228.1-P	Field mustard	nucleus	30.2	22.73
Bra041029.1-P	Field mustard	nucleus	29.87	21.87
GSMUA_Achr10P...	Banana	plastid	32.21	21.38
Bra021934.1-P	Field mustard	nucleus	27.52	20.71
Bra011282.1-P	Field mustard	nucleus	21.81	20.19
Bra023998.1-P	Field mustard	nucleus	21.81	19.82
Bra040396.1-P	Field mustard	nucleus	19.8	19.47
Bra032084.1-P	Field mustard	nucleus	21.14	19.38
Bra010231.1-P	Field mustard	nucleus	21.48	19.28
Bra021652.1-P	Field mustard	nucleus	20.47	19.0
Bra022808.1-P	Field mustard	nucleus	20.81	18.34
Bra001117.1-P	Field mustard	nucleus	19.46	18.18
Bra018303.1-P	Field mustard	nucleus	20.13	17.91
Bra032174.1-P	Field mustard	nucleus	18.12	16.93
Bra020617.1-P	Field mustard	nucleus	19.13	16.91
Bra019239.1-P	Field mustard	nucleus	19.46	16.67
Bra010005.1-P	Field mustard	nucleus	18.79	16.42

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra037368	EnsemblPlants:Bra037368.1	EnsemblPlants:Bra037368.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009987	GO:GO:0010150
GO:GO:0010200	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	UniProt:M4F8F6	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF35	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0002541A3F
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

AT4G01250 (E=1e-128) WRKY22, AtWRKY22 | WRKY22; transcription factor

Coordinates

chrA09:-:845955..847093

Molecular Weight (calculated)

32345.1 Da

IEP (calculated)

7.164

GRAVY (calculated)

-0.570

Length

298 amino acids

Sequence
(BLAST)

001: MADDWDLHAV VRGCSAVSSS ATTTATVFSS NVSSHTSPVF TFEPRSNTVV FGETRDLYTP FTQESNASSF SCLNYPEEPR QRQNQKRPLS LSASSGSVTS
101: KPTGASNTSR SKRRKIQHKK VCHVAAEALN NDVWAWRKYG QKPIKGSPYP RGYYRCSTSK GCLARKQVER NRSDPTMFIV TYTAEHNHPA PTHRNSLAGS
201: TRQKTSSDQP TTKSPTTTIA PYSTSPVTSS ADDFVLPVED IEVGDEDLLS LSDTVVSEDF FEGLEEFAVG DSFSGNSAPA SFDLSWVVNS AATASGGI

Best Arabidopsis Sequence Match ( AT4G01250.1 )
(BLAST)

001: MADDWDLHAV VRGCSAVSSS ATTTVYSPGV SSHTNPIFTV GRQSNAVSFG EIRDLYTPFT QESVVSSFSC INYPEEPRKP QNQKRPLSLS ASSGSVTSKP
101: SGSNTSRSKR RKIQHKKVCH VAAEALNSDV WAWRKYGQKP IKGSPYPRGY YRCSTSKGCL ARKQVERNRS DPKMFIVTYT AEHNHPAPTH RNSLAGSTRQ
201: KPSDQQTSKS PTTTIATYSS SPVTSADEFV LPVEDHLAVG DLDGEEDLLS LSDTVVSDDF FDGLEEFAAG DSFSGNSAPA SFDLSWVVNS AATTTGGI

Arabidopsis Description

WRKY22WRKY transcription factor 22 [Source:UniProtKB/Swiss-Prot;Acc:O04609]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.