Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra003251.1-P | |
| Bra007269.1-P | |
| Bra014671.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G23320.1 | Bra003251.1-P | AT3G56800.1 | 15733871 |
| AT2G23320.1 | Bra007269.1-P | AT3G56800.1 | 15733871 |
| AT2G23320.1 | Bra014671.1-P | AT3G56800.1 | 15733871 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38936 | Canola | nucleus | 94.67 | 99.34 |
| CDX89558 | Canola | nucleus | 90.28 | 96.64 |
| AT2G23320.1 | Thale cress | nucleus | 82.76 | 83.28 |
| Bra013779.1-P | Field mustard | nucleus | 26.02 | 58.04 |
| KRH77042 | Soybean | nucleus | 51.1 | 50.78 |
| KRH28430 | Soybean | nucleus | 50.47 | 50.16 |
| PGSC0003DMT400064256 | Potato | nucleus | 50.47 | 49.69 |
| Solyc02g093050.2.1 | Tomato | nucleus | 50.16 | 49.08 |
| VIT_07s0031g00080.t01 | Wine grape | nucleus | 50.78 | 48.21 |
| KRH57965 | Soybean | nucleus | 49.84 | 47.6 |
| KRH04545 | Soybean | nucleus | 49.53 | 47.59 |
| PGSC0003DMT400065506 | Potato | nucleus | 47.34 | 45.21 |
| Bra011282.1-P | Field mustard | nucleus | 38.87 | 38.51 |
| Bra023998.1-P | Field mustard | nucleus | 38.87 | 37.8 |
| Bra019239.1-P | Field mustard | nucleus | 41.07 | 37.64 |
| Bra032084.1-P | Field mustard | nucleus | 38.24 | 37.54 |
| Bra010231.1-P | Field mustard | nucleus | 38.87 | 37.35 |
| Bra001117.1-P | Field mustard | nucleus | 36.36 | 36.36 |
| Bra040396.1-P | Field mustard | nucleus | 34.48 | 36.3 |
| Bra021652.1-P | Field mustard | nucleus | 32.29 | 32.09 |
| Bra010005.1-P | Field mustard | nucleus | 32.92 | 30.79 |
| Bra022808.1-P | Field mustard | nucleus | 32.6 | 30.77 |
| Bra018303.1-P | Field mustard | nucleus | 31.97 | 30.45 |
| Bra020617.1-P | Field mustard | nucleus | 31.97 | 30.27 |
| Bra010839.1-P | Field mustard | nucleus | 17.24 | 21.07 |
| Bra032300.1-P | Field mustard | nucleus | 16.93 | 20.61 |
| Bra007413.1-P | Field mustard | nucleus | 15.99 | 18.89 |
| Bra037368.1-P | Field mustard | nucleus | 16.93 | 18.12 |
| Bra019297.1-P | Field mustard | nucleus | 16.93 | 18.06 |
| Bra014556.1-P | Field mustard | nucleus | 15.36 | 17.63 |
| Bra020814.1-P | Field mustard | nucleus | 16.61 | 17.21 |
| Bra026228.1-P | Field mustard | nucleus | 19.75 | 15.91 |
| Bra005388.1-P | Field mustard | nucleus | 20.06 | 15.88 |
| Bra013708.1-P | Field mustard | nucleus | 14.73 | 15.88 |
| Bra021934.1-P | Field mustard | nucleus | 18.5 | 14.9 |
| Bra022612.1-P | Field mustard | nucleus | 15.99 | 14.83 |
| Bra041029.1-P | Field mustard | nucleus | 18.81 | 14.74 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EnsemblPlantsGene:Bra032174 | EnsemblPlants:Bra032174.1 | EnsemblPlants:Bra032174.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005516 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009987 |
| GO:GO:0010200 | GO:GO:0043565 | GO:GO:0044212 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:M4ETP2 |
| PFAM:PF03106 | PFAM:PF10533 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF70 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI00025445D0 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | InterPro:Zn-cluster-dom | SEG:seg |
Description
AT2G23320 (E=6e-120) WRKY15 | WRKY15; calmodulin binding / transcription factor
Coordinates
chrA04:+:10335494..10336630
Molecular Weight (calculated)
34648.9 Da
IEP (calculated)
10.320
GRAVY (calculated)
-0.524
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVELMTRNY ISGVGVDSLA VQEAAASGLK SMENFIGLMS HESFNSNQPS SSSSAAITDL ELARNTTADA AVSKFKRVIS LLDRTPTGHA RFRRAPVISP
101: IQEIKPTPFQ APPQIHKGSF SSPIKTIEFS SLSSVTAESE HMKHHHHRRE TAPFGTQSLS TTVSSHHHRP SETAPFGTQS LSTTVSSFSK PTKRKCNSEN
201: HIAGKCASAS SGRCHCSKKR KIKQRRVIRV PAISAKMSDV PPDDYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE RAADDSSMLI VTYEGDHNHS
301: LSSADLAGAA VANLILESS
101: IQEIKPTPFQ APPQIHKGSF SSPIKTIEFS SLSSVTAESE HMKHHHHRRE TAPFGTQSLS TTVSSHHHRP SETAPFGTQS LSTTVSSFSK PTKRKCNSEN
201: HIAGKCASAS SGRCHCSKKR KIKQRRVIRV PAISAKMSDV PPDDYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE RAADDSSMLI VTYEGDHNHS
301: LSSADLAGAA VANLILESS
001: MAVELMTRNY ISGVGADSFA VQEAAASGLK SIENFIGLMS RDSFNSDQPS SSSASASASA AADLESARNT TADAAVSKFK RVISLLDRTR TGHARFRRAP
101: VHVISPVLLQ EEPKTTPFQS PLPPPPQMIR KGSFSSSMKT IDFSSLSSVT TESDNQKKIH HHQRPSETAP FASQTQSLST TVSSFSKSTK RKCNSENLLT
201: GKCASASSSG RCHCSKKRKI KQRRIIRVPA ISAKMSDVPP DDYSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERA ADDSSMLIVT YEGDHNHSLS
301: AADLAGAAVA DLILESS
101: VHVISPVLLQ EEPKTTPFQS PLPPPPQMIR KGSFSSSMKT IDFSSLSSVT TESDNQKKIH HHQRPSETAP FASQTQSLST TVSSFSKSTK RKCNSENLLT
201: GKCASASSSG RCHCSKKRKI KQRRIIRVPA ISAKMSDVPP DDYSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERA ADDSSMLIVT YEGDHNHSLS
301: AADLAGAAVA DLILESS
Arabidopsis Description
WRKY15Probable WRKY transcription factor 15 [Source:UniProtKB/Swiss-Prot;Acc:O22176]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.