Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G23320.1 | KRG89812 | AT3G56800.1 | 15733871 |
| AT2G23320.1 | KRG94975 | AT3G56800.1 | 15733871 |
| AT2G23320.1 | KRH18664 | AT3G56800.1 | 15733871 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH28430 | Soybean | nucleus | 91.9 | 91.9 |
| KRH04545 | Soybean | nucleus | 75.39 | 72.89 |
| KRH57965 | Soybean | nucleus | 75.7 | 72.75 |
| VIT_07s0031g00080.t01 | Wine grape | nucleus | 73.52 | 70.24 |
| PGSC0003DMT400064256 | Potato | nucleus | 65.42 | 64.81 |
| Solyc02g093050.2.1 | Tomato | nucleus | 65.42 | 64.42 |
| PGSC0003DMT400065506 | Potato | nucleus | 60.75 | 58.38 |
| CDY38936 | Canola | nucleus | 51.09 | 53.95 |
| AT2G23320.1 | Thale cress | nucleus | 53.27 | 53.94 |
| CDX89558 | Canola | nucleus | 48.91 | 52.68 |
| Bra032174.1-P | Field mustard | nucleus | 50.78 | 51.1 |
| KRH52606 | Soybean | nucleus | 45.79 | 49.0 |
| KRH61946 | Soybean | nucleus, plastid | 42.37 | 48.75 |
| KRH16144 | Soybean | nucleus | 43.93 | 44.62 |
| KRH37367 | Soybean | nucleus | 41.12 | 44.59 |
| KRH02746 | Soybean | nucleus | 43.61 | 43.75 |
| KRH04945 | Soybean | nucleus | 42.99 | 43.67 |
| KRH12362 | Soybean | nucleus | 39.25 | 43.0 |
| KRH19120 | Soybean | nucleus | 43.3 | 42.9 |
| KRH05637 | Soybean | nucleus | 36.76 | 42.45 |
| KRH15403 | Soybean | cytosol, nucleus, plastid | 32.71 | 38.04 |
| KRH71315 | Soybean | nucleus | 39.88 | 36.06 |
| KRH67313 | Soybean | nucleus | 38.01 | 35.78 |
| KRH32116 | Soybean | extracellular | 38.94 | 31.89 |
| KRH27887 | Soybean | nucleus | 17.76 | 26.64 |
| KRH77587 | Soybean | nucleus | 17.45 | 22.86 |
| KRH59007 | Soybean | nucleus | 18.07 | 22.75 |
| KRH27073 | Soybean | nucleus | 18.38 | 22.43 |
| KRH22261 | Soybean | nucleus | 18.38 | 22.26 |
| KRH42896 | Soybean | nucleus | 18.07 | 22.22 |
| KRH68270 | Soybean | nucleus | 16.82 | 21.34 |
| KRH06582 | Soybean | nucleus | 20.56 | 19.7 |
| KRH35230 | Soybean | nucleus | 18.07 | 19.53 |
| KRH59972 | Soybean | nucleus | 17.45 | 19.44 |
| KRG91594 | Soybean | nucleus | 18.69 | 18.69 |
| KRG96534 | Soybean | nucleus | 16.51 | 18.66 |
| KRH41244 | Soybean | nucleus | 16.82 | 18.49 |
| KRH08822 | Soybean | nucleus, plastid | 14.64 | 18.29 |
| KRH38335 | Soybean | nucleus | 20.25 | 17.47 |
| KRH40377 | Soybean | nucleus | 18.69 | 17.24 |
| KRH00856 | Soybean | nucleus | 18.69 | 17.09 |
| KRH42254 | Soybean | nucleus | 22.43 | 16.78 |
| KRH58373 | Soybean | nucleus | 21.81 | 16.28 |
| KRH08826 | Soybean | nucleus | 20.25 | 15.93 |
| KRH11863 | Soybean | nucleus | 23.05 | 14.15 |
| KRH36880 | Soybean | nucleus | 22.43 | 14.01 |
Protein Annotations
| EntrezGene:100804089 | MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A0R0LIG2 | EMBL:ACUP02000653 | EnsemblPlantsGene:GLYMA_01G189100 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 |
| InterPro:IPR036576 | EnsemblPlants:KRH77042 | ProteinID:KRH77042 | ProteinID:KRH77042.1 | PFAM:PF03106 | PFAM:PF10533 |
| PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF70 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI000189D00F |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | InterPro:Zn-cluster-dom | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr1:-:52420194..52421654
Molecular Weight (calculated)
35168.7 Da
IEP (calculated)
10.109
GRAVY (calculated)
-0.579
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVEFMMGYR NDTFAEDNAV REAASGLESV EKLIKLLSHT QQQYQTTSKS SMENIDTDYT AVADVAVSKF KKVISLLGRT RTGHARFRRA PVPVPVPVAS
101: PPPSEPRVYR ATPLQQIPPP TLHTHSVTDH SLIPKIERKD SSKTINFSYS NSFVSSLTAG DTDTKQPCSS SPSPATAFQI TNLSQVSSAG KPPLSSSSLK
201: RKCSSENLGS AKCGSSSSRC HCSKKSRKMR QKRVVRVPAI SLKMADIPPD DYSWRKYGQK PIKGSPHPRG YYKCSSVRGC PARKHVERAL DDPSMLVVTY
301: EGEHNHTLSA AEATNLILES S
101: PPPSEPRVYR ATPLQQIPPP TLHTHSVTDH SLIPKIERKD SSKTINFSYS NSFVSSLTAG DTDTKQPCSS SPSPATAFQI TNLSQVSSAG KPPLSSSSLK
201: RKCSSENLGS AKCGSSSSRC HCSKKSRKMR QKRVVRVPAI SLKMADIPPD DYSWRKYGQK PIKGSPHPRG YYKCSSVRGC PARKHVERAL DDPSMLVVTY
301: EGEHNHTLSA AEATNLILES S
001: MAVELMTRNY ISGVGADSFA VQEAAASGLK SIENFIGLMS RDSFNSDQPS SSSASASASA AADLESARNT TADAAVSKFK RVISLLDRTR TGHARFRRAP
101: VHVISPVLLQ EEPKTTPFQS PLPPPPQMIR KGSFSSSMKT IDFSSLSSVT TESDNQKKIH HHQRPSETAP FASQTQSLST TVSSFSKSTK RKCNSENLLT
201: GKCASASSSG RCHCSKKRKI KQRRIIRVPA ISAKMSDVPP DDYSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERA ADDSSMLIVT YEGDHNHSLS
301: AADLAGAAVA DLILESS
101: VHVISPVLLQ EEPKTTPFQS PLPPPPQMIR KGSFSSSMKT IDFSSLSSVT TESDNQKKIH HHQRPSETAP FASQTQSLST TVSSFSKSTK RKCNSENLLT
201: GKCASASSSG RCHCSKKRKI KQRRIIRVPA ISAKMSDVPP DDYSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERA ADDSSMLIVT YEGDHNHSLS
301: AADLAGAAVA DLILESS
Arabidopsis Description
WRKY15Probable WRKY transcription factor 15 [Source:UniProtKB/Swiss-Prot;Acc:O22176]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.