CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH08826	Soybean	nucleus	82.26	75.0
KRH08822	Soybean	nucleus, plastid	48.66	70.43
KRH35230	Soybean	nucleus	44.09	55.22
KRG91594	Soybean	nucleus	46.77	54.21
AT5G52830.1	Thale cress	nucleus	35.48	37.93
Bra022612.1-P	Field mustard	nucleus	34.41	37.21
CDY27045	Canola	nucleus	34.41	37.21
CDX96157	Canola	nucleus	34.14	36.49
VIT_16s0050g01480.t01	Wine grape	mitochondrion	17.74	36.26
KRH27887	Soybean	nucleus	20.7	35.98
KRH59972	Soybean	nucleus	26.08	33.68
KRH41244	Soybean	nucleus	26.08	33.22
KRH06582	Soybean	nucleus	29.57	32.84
KRH77587	Soybean	nucleus	21.51	32.65
Os02t0265200-01	Rice	nucleus	30.11	31.02
KRH40377	Soybean	nucleus	28.23	30.17
EES04883	Sorghum	nucleus	30.38	30.13
KRH00856	Soybean	nucleus	28.23	29.91
Zm00001d053369_P001	Maize	nucleus	29.57	29.81
Zm00001d037054_P001	Maize	nucleus	19.62	29.08
Zm00001d016052_P001	Maize	nucleus	29.03	28.2
Zm00001d008578_P001	Maize	nucleus	23.66	25.81
KRH59007	Soybean	nucleus	17.2	25.1
KRH42896	Soybean	nucleus	17.2	24.52
TraesCS7B01G240000.1	Wheat	nucleus	22.85	24.01
TraesCS7D01G336400.1	Wheat	nucleus	22.58	23.6
TraesCS7A01G343000.2	Wheat	nucleus	22.58	23.6
KRH27073	Soybean	nucleus	16.4	23.19
EER89819	Sorghum	nucleus	21.77	23.14
KRH22261	Soybean	nucleus	16.4	23.02
Os06t0504900-00	Rice	nucleus	22.31	21.5
KRH68270	Soybean	nucleus	14.25	20.95
HORVU7Hr1G080950.1	Barley	nucleus, plastid	22.85	20.88
KRH61946	Soybean	nucleus, plastid	15.59	20.79
KRH28430	Soybean	nucleus	17.74	20.56
KRH77042	Soybean	nucleus	17.47	20.25
KRH52606	Soybean	nucleus	16.13	20.0
KRH04545	Soybean	nucleus	17.74	19.88
KRH42254	Soybean	nucleus	22.85	19.81
KRH58373	Soybean	nucleus	22.85	19.77
KRH57965	Soybean	nucleus	17.47	19.46
KRH04945	Soybean	nucleus	16.4	19.3
KRH16144	Soybean	nucleus	16.4	19.3
KRH12362	Soybean	nucleus	15.05	19.11
KRH02746	Soybean	nucleus	16.4	19.06
KRG96534	Soybean	nucleus	14.52	19.01
KRH37367	Soybean	nucleus	15.05	18.92
KRH19120	Soybean	nucleus	16.4	18.83
KRH36880	Soybean	nucleus	25.54	18.48
KRH11863	Soybean	nucleus	25.81	18.36
KRH67313	Soybean	nucleus	16.4	17.89
KRH71315	Soybean	nucleus	16.13	16.9
KRH32116	Soybean	extracellular	16.4	15.56
KRH05637	Soybean	nucleus	9.14	12.23
KRH15403	Soybean	cytosol, nucleus, plastid	6.72	9.06

Protein Annotations

EntrezGene:100788213	MapMan:15.5.22	Gene3D:2.20.25.80	EMBL:ACUP02005794	EnsemblPlantsGene:GLYMA_09G129100	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:K7LDJ8	EnsemblPlants:KRH38335	ProteinID:KRH38335	ProteinID:KRH38335.1	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR32096	PANTHER:PTHR32096:SF22	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI00023382DE	InterPro:WRKY_dom
InterPro:WRKY_dom_sf	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:32339196..32340715

Molecular Weight (calculated)

40955.4 Da

IEP (calculated)

6.502

GRAVY (calculated)

-0.723

Length

372 amino acids

Sequence
(BLAST)

001: MTHEDWDLFA IVRSCKAATF TATTNTETPP TTTTTTTSNT TSCSGLSQEN GSFSFPNLVQ PTTNGFQELQ HQQLLINFNP TNTITSTSTS TSGLGINPNS
101: TFSEVAGFIG QQQIQQSLHH HLVPAPTNHT FIGTPSTTGF DRFQQQQLQT PEQQQPQQNQ PPLQAPQTSH ILSPTTQPQT PRSRKRKSQQ KKMVCHVTAQ
201: NLSSDLWAWR KYGQKPIKGS PYPRNYYRCS SCKGCAARKQ VERSTSEPNT FIVTYTGDHK HAKPVHRNSL AGNTRTKLST TRLPETHETV SCVIIENACS
301: SNSELSPMSV RSDTLENEAT LVPGEPDCPD TDIDPEVPSE EDEDVLIPNT GAMSDSIFLG LTNFDRDGVS TL

Best Arabidopsis Sequence Match ( AT4G01250.1 )
(BLAST)

001: MADDWDLHAV VRGCSAVSSS ATTTVYSPGV SSHTNPIFTV GRQSNAVSFG EIRDLYTPFT QESVVSSFSC INYPEEPRKP QNQKRPLSLS ASSGSVTSKP
101: SGSNTSRSKR RKIQHKKVCH VAAEALNSDV WAWRKYGQKP IKGSPYPRGY YRCSTSKGCL ARKQVERNRS DPKMFIVTYT AEHNHPAPTH RNSLAGSTRQ
201: KPSDQQTSKS PTTTIATYSS SPVTSADEFV LPVEDHLAVG DLDGEEDLLS LSDTVVSDDF FDGLEEFAAG DSFSGNSAPA SFDLSWVVNS AATTTGGI

Arabidopsis Description

WRKY22WRKY transcription factor 22 [Source:UniProtKB/Swiss-Prot;Acc:O04609]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.