Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY27045 | Canola | nucleus | 80.75 | 81.69 |
Bra022612.1-P | Field mustard | nucleus | 80.46 | 81.4 |
CDX96157 | Canola | nucleus | 81.03 | 81.03 |
KRG91594 | Soybean | nucleus | 38.51 | 41.74 |
KRH35230 | Soybean | nucleus | 35.34 | 41.41 |
VIT_16s0050g01480.t01 | Wine grape | mitochondrion | 21.26 | 40.66 |
AT4G01250.1 | Thale cress | nucleus | 32.47 | 37.92 |
KRH08822 | Soybean | nucleus, plastid | 27.87 | 37.74 |
KRH38335 | Soybean | nucleus | 37.93 | 35.48 |
Zm00001d037054_P001 | Maize | nucleus | 23.28 | 32.27 |
KRH08826 | Soybean | nucleus | 36.78 | 31.37 |
AT4G23550.1 | Thale cress | nucleus | 27.3 | 30.65 |
Zm00001d053369_P001 | Maize | nucleus | 32.18 | 30.35 |
Os02t0265200-01 | Rice | nucleus | 31.32 | 30.19 |
EES04883 | Sorghum | nucleus | 31.9 | 29.6 |
Zm00001d016052_P001 | Maize | nucleus | 32.47 | 29.5 |
Zm00001d008578_P001 | Maize | nucleus | 27.01 | 27.57 |
EER89819 | Sorghum | nucleus | 26.15 | 26.0 |
AT1G29280.1 | Thale cress | nucleus | 18.97 | 25.48 |
TraesCS7B01G240000.1 | Wheat | nucleus | 25.57 | 25.14 |
TraesCS7D01G336400.1 | Wheat | nucleus | 25.29 | 24.72 |
TraesCS7A01G343000.2 | Wheat | nucleus | 25.29 | 24.72 |
AT3G58710.1 | Thale cress | nucleus | 18.39 | 23.53 |
Os06t0504900-00 | Rice | nucleus | 25.29 | 22.8 |
HORVU7Hr1G080950.1 | Barley | nucleus, plastid | 25.57 | 21.87 |
AT1G30650.1 | Thale cress | nucleus | 25.29 | 20.47 |
AT2G34830.2 | Thale cress | nucleus | 25.0 | 19.95 |
AT4G31550.1 | Thale cress | nucleus | 18.39 | 19.69 |
AT2G24570.1 | Thale cress | nucleus | 17.82 | 19.31 |
AT5G28650.1 | Thale cress | nucleus | 16.67 | 17.58 |
AT4G24240.1 | Thale cress | nucleus | 17.24 | 17.0 |
AT3G04670.1 | Thale cress | nucleus | 16.09 | 16.97 |
AT2G23320.1 | Thale cress | nucleus | 14.94 | 16.4 |
AT2G30590.1 | Thale cress | nucleus | 16.67 | 15.26 |
Protein Annotations
MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:835360 | EMBL:AB493790 | ProteinID:AED96266.1 | EMBL:AF418310 |
EMBL:AK230436 | ArrayExpress:AT5G52830 | EnsemblPlantsGene:AT5G52830 | RefSeq:AT5G52830 | TAIR:AT5G52830 | RefSeq:AT5G52830-TAIR-G |
EnsemblPlants:AT5G52830.1 | TAIR:AT5G52830.1 | ProteinID:BAB10431.1 | EMBL:BT026451 | ncoils:Coil | GO:GO:0003674 |
GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007263 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009719 | GO:GO:0009739 | GO:GO:0009987 |
GO:GO:0042742 | GO:GO:0043565 | GO:GO:0044212 | GO:GO:0045892 | InterPro:IPR003657 | InterPro:IPR036576 |
RefSeq:NP_568777.1 | PFAM:PF03106 | PO:PO:0000036 | PO:PO:0000039 | PO:PO:0000293 | PO:PO:0001017 |
PO:PO:0001054 | PO:PO:0001185 | PO:PO:0003011 | PO:PO:0005417 | PO:PO:0006502 | PO:PO:0007115 |
PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009025 |
PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
PO:PO:0009052 | PO:PO:0009066 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025166 |
PO:PO:0025181 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF22 |
UniProt:Q0WKX3 | UniProt:Q9FLX8 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI00000AC9AD | Symbol:WRKY27 |
InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
WRKY27Probable WRKY transcription factor 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLX8]
Coordinates
chr5:+:21410769..21412526
Molecular Weight (calculated)
38723.5 Da
IEP (calculated)
4.473
GRAVY (calculated)
-0.927
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSEDWDLFA VVRSCSSSVS TTNSCAGHED DIGNCKQQQD PPPPPLFQAS SSCNELQDSC KPFLPVTTTT TTTWSPPPLL PPPKASSPSP NILLKQEQVL
101: LESQDQKPPL SVRVFPPSTS SSVFVFRGQR DQLLQQQSQP PLRSRKRKNQ QKRTICHVTQ ENLSSDLWAW RKYGQKPIKG SPYPRNYYRC SSSKGCLARK
201: QVERSNLDPN IFIVTYTGEH THPRPTHRNS LAGSTRNKSQ PVNPVPKPDT SPLSDTVKEE IHLSPTTPLK GNDDVQETNG DEDMVGQEVN MEEEEEEEEV
301: EEDDEEEEDD DDVDDLLIPN LAVRDRDDLF FAGSFPSWSA GSAGDGGG
101: LESQDQKPPL SVRVFPPSTS SSVFVFRGQR DQLLQQQSQP PLRSRKRKNQ QKRTICHVTQ ENLSSDLWAW RKYGQKPIKG SPYPRNYYRC SSSKGCLARK
201: QVERSNLDPN IFIVTYTGEH THPRPTHRNS LAGSTRNKSQ PVNPVPKPDT SPLSDTVKEE IHLSPTTPLK GNDDVQETNG DEDMVGQEVN MEEEEEEEEV
301: EEDDEEEEDD DDVDDLLIPN LAVRDRDDLF FAGSFPSWSA GSAGDGGG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.