Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29658 | Canola | nucleus | 73.68 | 86.96 |
| Bra021652.1-P | Field mustard | nucleus | 73.42 | 86.92 |
| CDX97806 | Canola | nucleus | 74.74 | 86.06 |
| CDX84824 | Canola | nucleus | 72.37 | 81.36 |
| Bra022808.1-P | Field mustard | nucleus | 72.37 | 81.36 |
| CDY23988 | Canola | nucleus | 72.11 | 80.59 |
| CDY10749 | Canola | nucleus | 70.79 | 80.54 |
| Bra018303.1-P | Field mustard | nucleus | 70.53 | 80.0 |
| CDY47130 | Canola | nucleus | 71.05 | 78.72 |
| GSMUA_Achr3P29310_001 | Banana | nucleus | 41.58 | 57.04 |
| GSMUA_Achr4P03660_001 | Banana | nucleus | 40.26 | 56.67 |
| AT3G04670.1 | Thale cress | nucleus | 41.32 | 47.58 |
| AT5G28650.1 | Thale cress | nucleus | 40.53 | 46.67 |
| GSMUA_Achr9P21560_001 | Banana | nucleus | 44.47 | 46.3 |
| AT2G24570.1 | Thale cress | nucleus | 30.26 | 35.83 |
| AT4G31550.1 | Thale cress | nucleus | 30.0 | 35.08 |
| AT2G23320.1 | Thale cress | nucleus | 28.68 | 34.38 |
| AT4G24240.1 | Thale cress | nucleus | 31.05 | 33.43 |
| AT1G29280.1 | Thale cress | nucleus | 14.74 | 21.62 |
| AT4G01250.1 | Thale cress | nucleus | 16.58 | 21.14 |
| AT3G58710.1 | Thale cress | nucleus | 14.21 | 19.85 |
| AT4G23550.1 | Thale cress | nucleus | 14.21 | 17.42 |
| AT5G52830.1 | Thale cress | nucleus | 15.26 | 16.67 |
| AT2G34830.2 | Thale cress | nucleus | 16.58 | 14.45 |
| AT1G30650.1 | Thale cress | nucleus | 16.32 | 14.42 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:817609 | ProteinID:AAB63078.1 | ProteinID:AEC08412.1 | EMBL:AF272747 |
| ArrayExpress:AT2G30590 | EnsemblPlantsGene:AT2G30590 | RefSeq:AT2G30590 | TAIR:AT2G30590 | RefSeq:AT2G30590-TAIR-G | EnsemblPlants:AT2G30590.1 |
| TAIR:AT2G30590.1 | EMBL:AY136441 | EMBL:BT000231 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005516 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019748 | GO:GO:0019760 |
| GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | RefSeq:NP_565703.1 | UniProt:O04336 | PFAM:PF03106 |
| PFAM:PF10533 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF12 | SMART:SM00774 | SUPFAM:SSF118290 |
| UniParc:UPI00000014FA | Symbol:WRKY21 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | InterPro:Zn-cluster-dom | SEG:seg |
Description
WRKY21Probable WRKY transcription factor 21 [Source:UniProtKB/Swiss-Prot;Acc:O04336]
Coordinates
chr2:+:13033418..13035797
Molecular Weight (calculated)
43007.9 Da
IEP (calculated)
10.314
GRAVY (calculated)
-0.884
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEIEGTNRA AVESCHRVLN LLHRSQQQDH VGFEKNLVSE TREAVIRFKR VGSLLSSSVG HARFRRAKKL QSHVSQSLLL DPCQQRTTEV PSSSSQKTPV
101: LRSGFQELSL RQPSDSLTLG TRSFSLNSNA KAPLLQLNQQ TMPPSNYPTL FPVQQQQQQQ QQQQQQEQQQ QQQQQQQQFH ERLQAHHLHQ QQQLQKHQAE
201: LMLRKCNGGI SLSFDNSSCT PTMSSTRSFV SSLSIDGSVA NIEGKNSFHF GVPSSTDQNS LHSKRKCPLK GDEHGSLKCG SSSRCHCAKK RKHRVRRSIR
301: VPAISNKVAD IPPDDYSWRK YGQKPIKGSP YPRGYYKCSS MRGCPARKHV ERCLEDPAML IVTYEAEHNH PKLPSQAITT
101: LRSGFQELSL RQPSDSLTLG TRSFSLNSNA KAPLLQLNQQ TMPPSNYPTL FPVQQQQQQQ QQQQQQEQQQ QQQQQQQQFH ERLQAHHLHQ QQQLQKHQAE
201: LMLRKCNGGI SLSFDNSSCT PTMSSTRSFV SSLSIDGSVA NIEGKNSFHF GVPSSTDQNS LHSKRKCPLK GDEHGSLKCG SSSRCHCAKK RKHRVRRSIR
301: VPAISNKVAD IPPDDYSWRK YGQKPIKGSP YPRGYYKCSS MRGCPARKHV ERCLEDPAML IVTYEAEHNH PKLPSQAITT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.