Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019297.1-P | Field mustard | nucleus | 83.55 | 86.62 |
| CDY10943 | Canola | nucleus | 83.23 | 86.29 |
| CDX94201 | Canola | nucleus | 82.9 | 85.95 |
| CDY41375 | Canola | nucleus | 84.52 | 85.06 |
| CDX76334 | Canola | nucleus | 84.19 | 84.74 |
| Bra020814.1-P | Field mustard | nucleus | 84.19 | 84.74 |
| CDY59336 | Canola | nucleus | 74.52 | 78.04 |
| CDY44115 | Canola | nucleus | 73.55 | 77.03 |
| Bra013708.1-P | Field mustard | nucleus | 73.23 | 76.69 |
| KRH27887 | Soybean | nucleus | 27.1 | 39.25 |
| KRH59972 | Soybean | nucleus | 35.48 | 38.19 |
| KRH41244 | Soybean | nucleus | 35.81 | 38.01 |
| KRH77587 | Soybean | nucleus | 29.35 | 37.14 |
| AT4G01250.1 | Thale cress | nucleus | 31.94 | 33.22 |
| VIT_02s0025g00420.t01 | Wine grape | nucleus | 34.52 | 32.52 |
| Solyc08g081610.2.1 | Tomato | nucleus | 30.32 | 31.02 |
| PGSC0003DMT400032091 | Potato | nucleus | 30.65 | 30.94 |
| Zm00001d037054_P001 | Maize | nucleus | 22.58 | 27.89 |
| AT5G52830.1 | Thale cress | nucleus | 30.65 | 27.3 |
| AT1G29280.1 | Thale cress | nucleus | 22.26 | 26.64 |
| Os02t0265200-01 | Rice | nucleus | 30.0 | 25.76 |
| AT3G58710.1 | Thale cress | nucleus | 22.58 | 25.74 |
| EES04883 | Sorghum | nucleus | 30.97 | 25.6 |
| Zm00001d053369_P001 | Maize | nucleus | 30.32 | 25.47 |
| TraesCS7B01G240000.1 | Wheat | nucleus | 28.06 | 24.58 |
| TraesCS7D01G336400.1 | Wheat | nucleus | 27.74 | 24.16 |
| Zm00001d016052_P001 | Maize | nucleus | 29.68 | 24.02 |
| TraesCS7A01G343000.2 | Wheat | nucleus | 27.42 | 23.88 |
| Zm00001d008578_P001 | Maize | nucleus | 26.13 | 23.75 |
| AT1G30650.1 | Thale cress | nucleus | 30.32 | 21.86 |
| EER89819 | Sorghum | nucleus | 24.52 | 21.71 |
| AT2G34830.2 | Thale cress | nucleus | 30.32 | 21.56 |
| Os06t0504900-00 | Rice | nucleus | 25.81 | 20.73 |
| HORVU7Hr1G080950.1 | Barley | nucleus, plastid | 26.45 | 20.15 |
| AT4G31550.1 | Thale cress | nucleus | 19.68 | 18.77 |
| AT2G24570.1 | Thale cress | nucleus | 19.03 | 18.38 |
| AT2G23320.1 | Thale cress | nucleus | 18.06 | 17.67 |
| AT3G04670.1 | Thale cress | nucleus | 17.74 | 16.67 |
| AT4G24240.1 | Thale cress | nucleus | 18.39 | 16.15 |
| AT5G28650.1 | Thale cress | nucleus | 16.77 | 15.76 |
| AT2G30590.1 | Thale cress | nucleus | 17.42 | 14.21 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:828455 | UniProt:A0A178V2E9 | UniProt:A0A2H1ZEQ0 | ProteinID:AEE84774.2 |
| ArrayExpress:AT4G23550 | EnsemblPlantsGene:AT4G23550 | RefSeq:AT4G23550 | TAIR:AT4G23550 | RefSeq:AT4G23550-TAIR-G | EnsemblPlants:AT4G23550.1 |
| TAIR:AT4G23550.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009987 | GO:GO:0010200 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 |
| RefSeq:NP_194086.4 | ProteinID:OAO99222.1 | PFAM:PF03106 | PO:PO:0000293 | PFscan:PS50811 | PANTHER:PTHR32096 |
| PANTHER:PTHR32096:SF51 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0000162B08 | Symbol:WRKY29 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
WRKY29WRKY29 [Source:UniProtKB/TrEMBL;Acc:A0A178V2E9]
Coordinates
chr4:+:12291632..12293367
Molecular Weight (calculated)
34422.9 Da
IEP (calculated)
6.681
GRAVY (calculated)
-0.822
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEVAYMDEG DLEAIVRGYS GSGDAFSGES SGTFSPSFCL PMETSSFYEP EMETSGLDEL GELYKPFYPF STQTILTSSV SLPEDSKPFR DDKKQRSHGC
101: LLSNGSRADH IRISESKSKK SKKNQQKRVV EQVKEENLLS DAWAWRKYGQ KPIKGSPYPR SYYRCSSSKG CLARKQVERN PQNPEKFTIT YTNEHNHELP
201: TRRNSLAGST RAKTSQPKPT LTKKSEKEVV SSPTSNPMIP SADESSVAVQ EMSVAETSTH QAAGAIEGRR LSNGLPSDLM SGSGTFPSFT GDFDELLNSQ
301: EFFSGYLWNY
101: LLSNGSRADH IRISESKSKK SKKNQQKRVV EQVKEENLLS DAWAWRKYGQ KPIKGSPYPR SYYRCSSSKG CLARKQVERN PQNPEKFTIT YTNEHNHELP
201: TRRNSLAGST RAKTSQPKPT LTKKSEKEVV SSPTSNPMIP SADESSVAVQ EMSVAETSTH QAAGAIEGRR LSNGLPSDLM SGSGTFPSFT GDFDELLNSQ
301: EFFSGYLWNY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.