Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010839.1-P | Field mustard | nucleus | 90.73 | 90.04 |
| CDX90180 | Canola | nucleus | 90.35 | 89.66 |
| CDX99806 | Canola | nucleus | 88.42 | 87.74 |
| CDY50779 | Canola | nucleus | 88.03 | 87.02 |
| Bra032300.1-P | Field mustard | nucleus | 88.03 | 87.02 |
| PGSC0003DMT400027378 | Potato | nucleus | 36.68 | 45.67 |
| PGSC0003DMT400052637 | Potato | nucleus | 43.24 | 43.75 |
| AT3G58710.1 | Thale cress | nucleus | 43.63 | 41.54 |
| Solyc07g055280.2.1 | Tomato | nucleus | 43.24 | 40.73 |
| GSMUA_Achr7P24840_001 | Banana | nucleus | 38.22 | 39.92 |
| GSMUA_Achr8P27790_001 | Banana | nucleus | 37.07 | 39.67 |
| Solyc10g007970.1.1 | Tomato | nucleus | 39.0 | 39.61 |
| GSMUA_Achr3P15690_001 | Banana | nucleus | 37.84 | 38.58 |
| TraesCS3D01G289500.1 | Wheat | nucleus | 41.7 | 38.43 |
| HORVU3Hr1G071750.1 | Barley | nucleus | 41.31 | 38.08 |
| GSMUA_Achr4P08360_001 | Banana | nucleus | 37.84 | 37.98 |
| TraesCS3B01G324400.1 | Wheat | nucleus | 41.7 | 37.5 |
| TraesCS3A01G289700.2 | Wheat | nucleus | 41.31 | 37.28 |
| Zm00001d012746_P001 | Maize | nucleus | 38.22 | 35.74 |
| Os01t0750100-03 | Rice | nucleus | 41.31 | 33.86 |
| Zm00001d043474_P001 | Maize | nucleus | 39.77 | 33.66 |
| HORVU3Hr1G069320.3 | Barley | nucleus | 37.84 | 33.0 |
| EES03611 | Sorghum | nucleus | 39.38 | 32.9 |
| GSMUA_Achr4P15540_001 | Banana | nucleus | 36.29 | 32.87 |
| TraesCS3B01G315600.1 | Wheat | cytosol | 37.45 | 32.66 |
| TraesCS3A01G281900.1 | Wheat | nucleus | 37.45 | 32.55 |
| TraesCS3D01G281900.1 | Wheat | nucleus, plastid | 37.45 | 32.55 |
| Zm00001d043569_P001 | Maize | cytosol | 35.91 | 32.4 |
| Os01t0730700-01 | Rice | nucleus | 39.38 | 31.97 |
| EES03563 | Sorghum | plastid | 39.38 | 31.97 |
| AT4G23550.1 | Thale cress | nucleus | 26.64 | 22.26 |
| AT4G01250.1 | Thale cress | nucleus | 25.48 | 22.15 |
| AT1G30650.1 | Thale cress | nucleus | 32.43 | 19.53 |
| AT2G34830.2 | Thale cress | nucleus | 32.43 | 19.27 |
| AT5G52830.1 | Thale cress | nucleus | 25.48 | 18.97 |
| AT2G24570.1 | Thale cress | nucleus | 21.62 | 17.45 |
| AT2G23320.1 | Thale cress | nucleus | 20.08 | 16.4 |
| AT4G31550.1 | Thale cress | nucleus | 20.46 | 16.31 |
| AT4G24240.1 | Thale cress | nucleus | 22.01 | 16.15 |
| AT3G04670.1 | Thale cress | nucleus | 20.46 | 16.06 |
| AT5G28650.1 | Thale cress | nucleus | 20.08 | 15.76 |
| AT2G30590.1 | Thale cress | nucleus | 21.62 | 14.74 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:839802 | UniProt:A0A178W690 | ProteinID:AAF88112.1 | EMBL:AB493485 |
| ProteinID:AEE31068.1 | EMBL:AF452173 | ArrayExpress:AT1G29280 | EnsemblPlantsGene:AT1G29280 | RefSeq:AT1G29280 | TAIR:AT1G29280 |
| RefSeq:AT1G29280-TAIR-G | EnsemblPlants:AT1G29280.1 | TAIR:AT1G29280.1 | EMBL:BT026354 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | RefSeq:NP_174222.2 |
| ProteinID:OAP14009.1 | PFAM:PF03106 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009031 | PO:PO:0009047 |
| PO:PO:0020030 | PO:PO:0020100 | PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF19 | UniProt:Q0V866 |
| UniProt:Q9LP56 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0000138F86 | Symbol:WRKY65 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
WRKY65WRKY65 [Source:UniProtKB/TrEMBL;Acc:A0A178W690]
Coordinates
chr1:+:10236337..10237990
Molecular Weight (calculated)
29055.8 Da
IEP (calculated)
5.469
GRAVY (calculated)
-0.886
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRGLDMARS YNDHESSQET GPESPNSSTF NGMKALISSH SPKRSRRSVE KRVVNVPMKE MEGSRHKGDT TPPSDSWAWR KYGQKPIKGS PYPRGYYRCS
101: STKGCPARKQ VERSRDDPTM ILITYTSEHN HPWPLTSSTR NGPKPKPEPK PEPEPEVEPE AEEEDNKFMV LGRGIETTPS CVDEFAWFTE METTSSTILE
201: SPIFSSEKKT AVSGADDVAV FFPMGEEDES LFADLGELPE CSVVFRHRSS VVGSQVEIF
101: STKGCPARKQ VERSRDDPTM ILITYTSEHN HPWPLTSSTR NGPKPKPEPK PEPEPEVEPE AEEEDNKFMV LGRGIETTPS CVDEFAWFTE METTSSTILE
201: SPIFSSEKKT AVSGADDVAV FFPMGEEDES LFADLGELPE CSVVFRHRSS VVGSQVEIF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.