Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g055280.2.1 | Tomato | nucleus | 96.88 | 90.18 |
| PGSC0003DMT400027378 | Potato | nucleus | 44.53 | 54.81 |
| CDX71933 | Canola | nucleus | 35.16 | 45.23 |
| KRH22261 | Soybean | nucleus | 46.48 | 44.91 |
| KRH27073 | Soybean | nucleus | 46.09 | 44.87 |
| CDY49246 | Canola | nucleus | 46.09 | 43.54 |
| Bra007413.1-P | Field mustard | nucleus | 45.7 | 43.33 |
| AT1G29280.1 | Thale cress | nucleus | 43.75 | 43.24 |
| CDX89000 | Canola | nucleus | 46.09 | 42.29 |
| CDY00583 | Canola | nucleus | 46.09 | 42.29 |
| Bra010839.1-P | Field mustard | nucleus | 42.97 | 42.15 |
| CDX90180 | Canola | nucleus | 42.97 | 42.15 |
| CDX99806 | Canola | nucleus | 42.97 | 42.15 |
| Bra014556.1-P | Field mustard | nucleus | 45.7 | 42.09 |
| AT3G58710.1 | Thale cress | nucleus | 44.53 | 41.91 |
| PGSC0003DMT400073267 | Potato | nucleus | 48.83 | 41.81 |
| Bra032300.1-P | Field mustard | nucleus | 42.58 | 41.6 |
| CDY50779 | Canola | nucleus | 41.8 | 40.84 |
| GSMUA_Achr7P24840_001 | Banana | nucleus | 36.33 | 37.5 |
| GSMUA_Achr3P15690_001 | Banana | nucleus | 37.11 | 37.4 |
| GSMUA_Achr4P08360_001 | Banana | nucleus | 37.11 | 36.82 |
| HORVU3Hr1G071750.1 | Barley | nucleus | 40.23 | 36.65 |
| TraesCS3D01G289500.1 | Wheat | nucleus | 39.84 | 36.3 |
| GSMUA_Achr8P27790_001 | Banana | nucleus | 33.98 | 35.95 |
| TraesCS3B01G324400.1 | Wheat | nucleus | 39.84 | 35.42 |
| TraesCS3A01G289700.2 | Wheat | nucleus | 39.45 | 35.19 |
| GSMUA_Achr4P15540_001 | Banana | nucleus | 36.33 | 32.52 |
| Zm00001d012746_P001 | Maize | nucleus | 34.77 | 32.13 |
| TraesCS3A01G281900.1 | Wheat | nucleus | 36.72 | 31.54 |
| TraesCS3B01G315600.1 | Wheat | cytosol | 35.94 | 30.98 |
| HORVU3Hr1G069320.3 | Barley | nucleus | 35.94 | 30.98 |
| Zm00001d043474_P001 | Maize | nucleus | 36.72 | 30.72 |
| Os01t0750100-03 | Rice | nucleus | 37.89 | 30.7 |
| EES03611 | Sorghum | nucleus | 37.11 | 30.65 |
| TraesCS3D01G281900.1 | Wheat | nucleus, plastid | 35.55 | 30.54 |
| Zm00001d043569_P001 | Maize | cytosol | 32.81 | 29.27 |
| Os01t0730700-01 | Rice | nucleus | 34.77 | 27.9 |
| PGSC0003DMT400023272 | Potato | mitochondrion, nucleus | 26.56 | 27.87 |
| EES03563 | Sorghum | plastid | 34.38 | 27.59 |
| PGSC0003DMT400032091 | Potato | nucleus | 23.83 | 19.87 |
| PGSC0003DMT400039061 | Potato | nucleus | 31.25 | 19.37 |
| PGSC0003DMT400000215 | Potato | nucleus | 26.56 | 19.32 |
| PGSC0003DMT400075531 | Potato | nucleus | 22.27 | 18.27 |
| PGSC0003DMT400024632 | Potato | nucleus | 23.83 | 18.26 |
| PGSC0003DMT400064256 | Potato | nucleus | 22.66 | 17.9 |
| PGSC0003DMT400065506 | Potato | nucleus | 22.27 | 17.07 |
| PGSC0003DMT400038986 | Potato | nucleus | 22.27 | 16.47 |
| PGSC0003DMT400020517 | Potato | nucleus | 21.88 | 15.82 |
| PGSC0003DMT400013632 | Potato | nucleus | 21.88 | 15.77 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:M1BTR1 | PFAM:PF03106 | EnsemblPlantsGene:PGSC0003DMG400020432 |
| PGSC:PGSC0003DMG400020432 | EnsemblPlants:PGSC0003DMT400052637 | PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF19 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI0002967C74 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
WRKY transcription factor 5 [Source:PGSC_GENE;Acc:PGSC0003DMG400020432]
Coordinates
chr7:+:50385331..50389170
Molecular Weight (calculated)
28188.6 Da
IEP (calculated)
5.597
GRAVY (calculated)
-0.751
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDSLYKNPF FHKQEDSTGT PPDNAADSCF SGDEAAEVSM PSPRKSRRGA KKKVISVPII EGDGSRSKGE VYPPQDSWSW RKYGQKPIKG SPYPRGYYRC
101: SSSKGCPARK QVERSRLDPT MLLITYCSEH NHQIPAAAAA KHHHTNHPTT TTTTDSTVLD KSSPEEPDLF AYQHDNGFSE LAGELGWFSD MGTTTTLMES
201: TSSSMVGSTW NDSDVALMLP IREEDQSLFG DLGELPECSV VFRRYSVETP CCGGTG
101: SSSKGCPARK QVERSRLDPT MLLITYCSEH NHQIPAAAAA KHHHTNHPTT TTTTDSTVLD KSSPEEPDLF AYQHDNGFSE LAGELGWFSD MGTTTTLMES
201: TSSSMVGSTW NDSDVALMLP IREEDQSLFG DLGELPECSV VFRRYSVETP CCGGTG
001: MKRGLDMARS YNDHESSQET GPESPNSSTF NGMKALISSH SPKRSRRSVE KRVVNVPMKE MEGSRHKGDT TPPSDSWAWR KYGQKPIKGS PYPRGYYRCS
101: STKGCPARKQ VERSRDDPTM ILITYTSEHN HPWPLTSSTR NGPKPKPEPK PEPEPEVEPE AEEEDNKFMV LGRGIETTPS CVDEFAWFTE METTSSTILE
201: SPIFSSEKKT AVSGADDVAV FFPMGEEDES LFADLGELPE CSVVFRHRSS VVGSQVEIF
101: STKGCPARKQ VERSRDDPTM ILITYTSEHN HPWPLTSSTR NGPKPKPEPK PEPEPEVEPE AEEEDNKFMV LGRGIETTPS CVDEFAWFTE METTSSTILE
201: SPIFSSEKKT AVSGADDVAV FFPMGEEDES LFADLGELPE CSVVFRHRSS VVGSQVEIF
Arabidopsis Description
WRKY65WRKY65 [Source:UniProtKB/TrEMBL;Acc:A0A178W690]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.