Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d012746_P001 | Maize | nucleus | 78.06 | 87.36 |
| TraesCS3D01G289500.1 | Wheat | nucleus | 65.48 | 72.24 |
| Os01t0750100-03 | Rice | nucleus | 73.23 | 71.84 |
| TraesCS3B01G324400.1 | Wheat | nucleus | 65.48 | 70.49 |
| TraesCS3A01G289700.2 | Wheat | nucleus | 64.84 | 70.03 |
| HORVU3Hr1G071750.1 | Barley | nucleus | 63.23 | 69.75 |
| CDX71933 | Canola | nucleus | 26.13 | 40.7 |
| PGSC0003DMT400027378 | Potato | nucleus | 26.45 | 39.42 |
| AT1G29280.1 | Thale cress | nucleus | 32.9 | 39.38 |
| EES03563 | Sorghum | plastid | 39.68 | 38.56 |
| KRH59007 | Soybean | nucleus | 31.61 | 38.43 |
| CDX90180 | Canola | nucleus | 32.26 | 38.31 |
| Bra010839.1-P | Field mustard | nucleus | 32.26 | 38.31 |
| Bra032300.1-P | Field mustard | nucleus | 32.26 | 38.17 |
| CDY50779 | Canola | nucleus | 31.94 | 37.79 |
| KRH27073 | Soybean | nucleus | 31.61 | 37.26 |
| KRH42896 | Soybean | nucleus | 31.29 | 37.16 |
| PGSC0003DMT400052637 | Potato | nucleus | 30.65 | 37.11 |
| CDY49246 | Canola | nucleus | 31.94 | 36.53 |
| CDX99806 | Canola | nucleus | 30.65 | 36.4 |
| Bra007413.1-P | Field mustard | nucleus | 31.61 | 36.3 |
| AT3G58710.1 | Thale cress | nucleus | 31.61 | 36.03 |
| KRH22261 | Soybean | nucleus | 30.65 | 35.85 |
| CDX89000 | Canola | nucleus | 31.94 | 35.48 |
| CDY00583 | Canola | nucleus | 31.94 | 35.48 |
| Bra014556.1-P | Field mustard | nucleus | 31.61 | 35.25 |
| VIT_10s0003g01600.t01 | Wine grape | nucleus | 30.97 | 34.53 |
| Solyc07g055280.2.1 | Tomato | nucleus | 30.0 | 33.82 |
| PGSC0003DMT400073267 | Potato | nucleus | 31.94 | 33.11 |
| Solyc10g007970.1.1 | Tomato | nucleus | 26.77 | 32.55 |
| Solyc02g072190.2.1 | Tomato | nucleus | 31.61 | 31.82 |
| EES04883 | Sorghum | nucleus | 25.16 | 20.8 |
| KXG37092 | Sorghum | nucleus | 24.19 | 19.13 |
| KXG22622 | Sorghum | nucleus | 22.26 | 18.96 |
| EER89819 | Sorghum | nucleus | 21.29 | 18.86 |
| EES14755 | Sorghum | nucleus | 19.03 | 18.55 |
| EES11384 | Sorghum | nucleus | 18.71 | 18.41 |
| OQU84894 | Sorghum | nucleus | 17.74 | 18.39 |
| OQU92055 | Sorghum | nucleus | 24.84 | 18.03 |
| EES07413 | Sorghum | nucleus | 26.13 | 16.3 |
| EES03310 | Sorghum | nucleus, plastid | 21.61 | 16.22 |
| KXG27029 | Sorghum | nucleus | 25.81 | 15.84 |
| EES17321 | Sorghum | nucleus | 17.42 | 14.56 |
| EER91209 | Sorghum | nucleus | 16.13 | 14.2 |
| KXG37354 | Sorghum | nucleus | 18.39 | 13.13 |
| EER93478 | Sorghum | nucleus | 16.77 | 12.81 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:8072077 | UniProt:C5XK43 | EnsemblPlants:EES03611 | ProteinID:EES03611 |
| ProteinID:EES03611.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF19 |
| SMART:SM00774 | EnsemblPlantsGene:SORBI_3003G296300 | SUPFAM:SSF118290 | unigene:Sbi.7702 | UniParc:UPI0001A84C7E | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | RefSeq:XP_002458491.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:62835017..62837081
Molecular Weight (calculated)
33693.7 Da
IEP (calculated)
4.463
GRAVY (calculated)
-0.861
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSAEDGYCS SDSPRAESPD EPLLPAAVAD ADAESPRAAG SGMNKRERDL SDLPASPSSP LPPAKRSRRS VEKRVVSVPL AECGDRPRGA TGEGPPPSDS
101: WAWRKYGQKP IKGSPYPRGY YRCSSSKGCP ARKQVERSRA DPTVLLVTYT FDHNHEAPQP KSSSCHQQGK PSTRPPAPKP EPVVEQDELG PEHELAETEV
201: PEQQEPVEEE QEQKVVPGLA GPEAEAEAEP TATVAPAAAE EDESFDFGWF DQYPTWHRSA LYAPLLPPEE WERELQGEDA LFAGLGELPE CAVVFGRRRE
301: LSLATTAPCS
101: WAWRKYGQKP IKGSPYPRGY YRCSSSKGCP ARKQVERSRA DPTVLLVTYT FDHNHEAPQP KSSSCHQQGK PSTRPPAPKP EPVVEQDELG PEHELAETEV
201: PEQQEPVEEE QEQKVVPGLA GPEAEAEAEP TATVAPAAAE EDESFDFGWF DQYPTWHRSA LYAPLLPPEE WERELQGEDA LFAGLGELPE CAVVFGRRRE
301: LSLATTAPCS
001: MKRGLDMARS YNDHESSQET GPESPNSSTF NGMKALISSH SPKRSRRSVE KRVVNVPMKE MEGSRHKGDT TPPSDSWAWR KYGQKPIKGS PYPRGYYRCS
101: STKGCPARKQ VERSRDDPTM ILITYTSEHN HPWPLTSSTR NGPKPKPEPK PEPEPEVEPE AEEEDNKFMV LGRGIETTPS CVDEFAWFTE METTSSTILE
201: SPIFSSEKKT AVSGADDVAV FFPMGEEDES LFADLGELPE CSVVFRHRSS VVGSQVEIF
101: STKGCPARKQ VERSRDDPTM ILITYTSEHN HPWPLTSSTR NGPKPKPEPK PEPEPEVEPE AEEEDNKFMV LGRGIETTPS CVDEFAWFTE METTSSTILE
201: SPIFSSEKKT AVSGADDVAV FFPMGEEDES LFADLGELPE CSVVFRHRSS VVGSQVEIF
Arabidopsis Description
WRKY65WRKY65 [Source:UniProtKB/TrEMBL;Acc:A0A178W690]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.