CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
EER94083
EES01631
EES09201
EES16322
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24570.1	EES01631	AT3G56800.1	15733871
AT2G24570.1	EES09201	AT3G56800.1	15733871
AT2G24570.1	EES16322	AT3G56800.1	15733871
AT2G24570.1	OQU78227	AT3G56800.1	15733871
AT2G24570.1	EER94083	AT5G28900.1	21798944
AT4G31550.1	EES01631	AT3G56800.1	15733871
AT4G31550.1	EES09201	AT3G56800.1	15733871
AT4G31550.1	EES16322	AT3G56800.1	15733871
AT4G31550.1	OQU78227	AT3G56800.1	15733871

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024376_P001	Maize	nucleus	79.56	81.35
TraesCS5D01G382600.1	Wheat	nucleus	54.09	57.33
TraesCS5B01G375100.1	Wheat	nucleus	53.77	57.19
TraesCS5A01G373100.1	Wheat	nucleus	53.14	56.71
TraesCS5B01G067700.1	Wheat	nucleus	52.83	56.38
TraesCS5A01G060200.1	Wheat	nucleus	52.2	56.27
TraesCS5D01G071800.1	Wheat	nucleus	52.2	56.08
HORVU5Hr1G092770.2	Barley	mitochondrion	52.52	55.85
EES11384	Sorghum	nucleus	52.2	52.7
HORVU5Hr1G015120.1	Barley	nucleus	49.69	52.32
Os08t0235800-00	Rice	nucleus	55.97	51.74
GSMUA_Achr9P22950_001	Banana	nucleus	44.65	50.53
CDY20325	Canola	nucleus	39.31	44.17
CDX68763	Canola	nucleus	41.2	43.96
Solyc08g006320.2.1	Tomato	nucleus	45.28	43.9
CDY60852	Canola	nucleus	40.88	43.62
PGSC0003DMT400024632	Potato	nucleus	45.28	43.11
CDX72310	Canola	nucleus	38.36	42.96
GSMUA_Achr3P27880_001	Banana	nucleus	37.11	42.91
CDY13441	Canola	nucleus	38.68	41.98
CDY23304	Canola	nucleus	39.94	41.5
Bra011282.1-P	Field mustard	nucleus	41.2	40.68
AT4G31550.1	Thale cress	nucleus	41.51	40.62
CDY36432	Canola	nucleus	35.85	40.43
CDY45583	Canola	nucleus	41.2	40.31
AT2G24570.1	Thale cress	nucleus	40.57	40.19
PGSC0003DMT400075531	Potato	nucleus	38.99	39.74
Bra032084.1-P	Field mustard	nucleus	40.57	39.69
Bra023998.1-P	Field mustard	nucleus	40.88	39.63
Bra010231.1-P	Field mustard	nucleus	40.25	38.55
OQU84894	Sorghum	nucleus	35.53	37.79
Solyc12g096350.1.1	Tomato	nucleus	36.48	34.32
EER91209	Sorghum	nucleus	29.87	26.99
EES17321	Sorghum	nucleus	30.19	25.88
EER93478	Sorghum	nucleus	29.56	23.15
KXG37354	Sorghum	nucleus	30.5	22.35
EES03611	Sorghum	nucleus	18.55	19.03
KXG22622	Sorghum	nucleus	20.13	17.58
EES04883	Sorghum	nucleus	20.44	17.33
EER89819	Sorghum	nucleus	17.92	16.29
OQU92055	Sorghum	nucleus	21.7	16.16
EES03563	Sorghum	plastid	16.04	15.99
KXG37092	Sorghum	nucleus	19.18	15.56
EES03310	Sorghum	nucleus, plastid	19.81	15.25
KXG27029	Sorghum	nucleus	23.58	14.85
EES07413	Sorghum	nucleus	22.33	14.29

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:C5YJD3	EnsemblPlants:EES14755	ProteinID:EES14755	ProteinID:EES14755.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657
InterPro:IPR036576	PFAM:PF03106	PFAM:PF10533	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF32
SMART:SM00774	EnsemblPlantsGene:SORBI_3007G085300	SUPFAM:SSF118290	unigene:Sbi.12545	UniParc:UPI0001A87ED0	InterPro:WRKY_dom
InterPro:WRKY_dom_sf	RefSeq:XP_002445260.1	InterPro:Zn-cluster-dom	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr7:-:10754655..10756113

Molecular Weight (calculated)

32981.0 Da

IEP (calculated)

10.374

GRAVY (calculated)

-0.417

Length

318 amino acids

Sequence
(BLAST)

001: MAVDLMSSCG GRAGAYEQLA FQEAAAAGLR SLELLASSLS SPCGAGQRAE SPPLGQIADQ AVSRFRRVIN LLDRTGHARF RRAPVAAVET ETTLQAAVEE
101: PQPPQKKAAL TLDFTKPVPV PAAAATKPAA PAPAPAVSGT STSFLSSVTA GGGGEGSVSK GCSLAVSSGK PPLPKRKLPC PASAPQQAQA HQHQHQHQHL
201: AESSAGRCHC SKKKRSRQGL SRRTVRVPAA AAAAGAPGSH VPASSDIPAD DYSWRKYGQK PIKGSPYPRG YYRCSSAKGC PARKHVERAA DDPAMLVVTY
301: EGDHRHDAAA AAVRARAA

Best Arabidopsis Sequence Match ( AT4G31550.1 )
(BLAST)

001: MAVDLMRFPK IDDQTAIQEA ASQGLQSMEH LIRVLSNRPE QQHNVDCSEI TDFTVSKFKT VISLLNRTGH ARFRRGPVHS TSSAASQKLQ SQIVKNTQPE
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA

Arabidopsis Description

WRKY11Probable WRKY transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV15]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.