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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d034475_P001 Maize cytosol 62.44 83.38
Os03t0798500-01 Rice nucleus 55.3 63.16
TraesCS5A01G443600.1 Wheat nucleus 52.3 50.67
TraesCS5D01G451000.1 Wheat nucleus 52.77 47.61
HORVU5Hr1G106570.3 Barley nucleus 51.38 45.33
EES17321 Sorghum nucleus 32.03 37.47
EER91209 Sorghum nucleus 29.95 36.93
EER93478 Sorghum nucleus 32.72 34.98
EES11384 Sorghum nucleus 23.96 33.02
EES14755 Sorghum nucleus 22.35 30.5
OQU84894 Sorghum nucleus 20.74 30.1
KRH15403 Soybean cytosol, nucleus, plastid 12.9 20.29
EES03611 Sorghum nucleus 13.13 18.39
EER89819 Sorghum nucleus 14.29 17.71
KXG37092 Sorghum nucleus 15.21 16.84
KXG22622 Sorghum nucleus 13.82 16.48
EES03563 Sorghum plastid 11.98 16.3
EES04883 Sorghum nucleus 14.06 16.27
OQU92055 Sorghum nucleus 13.82 14.05
EES03310 Sorghum nucleus, plastid 12.44 13.08
KXG27029 Sorghum nucleus 14.75 12.67
EES07413 Sorghum nucleus 14.29 12.47
Protein Annotations
MapMan:15.5.22Gene3D:2.20.25.80UniProt:A0A1B6QHF9GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0043565InterPro:IPR003657InterPro:IPR036576EnsemblPlants:KXG37354ProteinID:KXG37354
ProteinID:KXG37354.1PFAM:PF03106PFAM:PF10533PFscan:PS50811PANTHER:PTHR31282PANTHER:PTHR31282:SF15
SMART:SM00774EnsemblPlantsGene:SORBI_3001G055400SUPFAM:SSF118290UniParc:UPI00081AD290InterPro:WRKY_domInterPro:WRKY_dom_sf
InterPro:Zn-cluster-domSEG:seg::::
Description
hypothetical protein
Coordinates
chr1:-:4145000..4147281
Molecular Weight (calculated)
46091.1 Da
IEP (calculated)
9.795
GRAVY (calculated)
-0.375
Length
434 amino acids
Sequence
(BLAST)
001: MKAMEVVEEA NRAAVESCKK LVAVLSLSGA DAFRPLPVAA ETDEAVARFG KVVAVLSDRL GHARARVAGK RSPPAPPVDA SCLLEYHPSL AVAPRHTTNG
101: GHLLVSATSP PPPPPPPPTT TTSLLASMTM RSAAEPMTMR SQKAEVVAPA VLVSPPCASN VTLTPAPAKK FDRSMFLETS LLELNNSCSV PPSSSPAMAV
201: QKSSPKVAAP NPCTSTPHIQ LQPTTQFQPP PQQQAAKKQK SFQFDQTPSG EQFHIEVPVP LPRGAAPAAK EVISFSFDNN SVCTSSAATS FFTSISSQLI
301: SMSDAATSSA ARPATAKKMC GKGVEDGGGG VRCHCPKKKK PREKRVVRVP AISDKNADIP ADNYSWRKYG QKPIKGSPHP RGYYRCSSKK DCPARKHVER
401: CRSDAAMLIV TYENDHNHAQ PLDPSVLTAA NAEP
Best Arabidopsis Sequence Match ( AT5G28650.1 )
(BLAST)
001: MEEVEAANKA AVESCHGVLN LLSQQTNDSK SIMVETREAV CKFKRVSSLL SRGLGQRKIK KLNNNNYKFS SSLLPQHMFL ESPVCSNNAI SGCIPILAPK
101: PLQIVPAGPP PLMLFNQNMC LDKSFLELKP PSSRAVDPKP YQFIHTHQQG VYSRSKSGLN LKFDGSIGAS CYSPSISNGS RSFVSSLSMD GSVTDYDRNS
201: FHLIGLPQGS DHISQHSRRT SCSGSLKCGS KSKCHCSKKR KLRVKRSIKV PAISNKIADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE
301: RCVEETSMLI VTYEGEHNHS RILSSQSAHT
Arabidopsis Description
WRKY74Probable WRKY transcription factor 74 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.