Factsheet for HORVU5Hr1G106570.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
mitochondrion 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G443600.1	Wheat	nucleus	82.93	91.07
TraesCS5D01G451000.1	Wheat	nucleus	84.55	86.49
Os03t0798500-01	Rice	nucleus	46.14	59.74
KXG37354	Sorghum	nucleus	45.33	51.38
Zm00001d034475_P001	Maize	cytosol	28.86	43.69
HORVU4Hr1G012580.5	Barley	nucleus, plastid	10.16	32.68
HORVU3Hr1G097420.1	Barley	nucleus	21.14	32.6
HORVU5Hr1G094050.1	Barley	nucleus	25.61	31.9
HORVU5Hr1G092770.2	Barley	mitochondrion	18.9	31.1
HORVU5Hr1G015120.1	Barley	nucleus	18.5	30.13
HORVU4Hr1G011590.2	Barley	nucleus, plastid	24.59	29.37
HORVU5Hr1G122800.4	Barley	plastid	15.04	28.68
HORVU5Hr1G052630.2	Barley	plastid	11.99	23.41
HORVU4Hr1G082550.2	Barley	nucleus	10.16	20.33
HORVU1Hr1G092360.1	Barley	nucleus	10.98	20.15
HORVU3Hr1G039500.1	Barley	plastid	12.4	19.24
HORVU3Hr1G071750.1	Barley	nucleus	10.98	19.22
KRH15403	Soybean	cytosol, nucleus, plastid	10.57	18.84
HORVU5Hr1G124320.1	Barley	nucleus	12.2	16.95
HORVU3Hr1G069320.3	Barley	nucleus	9.76	16.16
HORVU1Hr1G051260.3	Barley	nucleus	11.99	15.73
HORVU2Hr1G102740.3	Barley	nucleus	9.96	15.71
HORVU7Hr1G080950.1	Barley	nucleus, plastid	11.18	13.51
HORVU3Hr1G055910.5	Barley	plastid	11.18	12.44
HORVU6Hr1G067680.3	Barley	nucleus	9.96	8.73

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A287SME8	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU5Hr1G106570	EnsemblPlants:HORVU5Hr1G106570.3	InterPro:IPR003657	InterPro:IPR036576
PFAM:PF03106	PFAM:PF10533	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF12	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000B470EB8	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	InterPro:Zn-cluster-dom	SEG:seg

Description

No Description!

Coordinates

chrchr5H:+:624439615..624441809

Molecular Weight (calculated)

52590.6 Da

IEP (calculated)

9.487

GRAVY (calculated)

-0.418

Length

492 amino acids

Sequence
(BLAST)

001: QRDQQQCRIC SLYKVAARSS GNFFLLRPPL LRPCEASACA RMGVEEANRA AVVSCKRLVA RLSLSAGDPF RLAAVAAETE EAVSRFGKVV NILSSRVGHA
101: RARVGRRSSP AGDPIARCLL EYHPPPPVPY CPPATATATA TAPQLHGSSS STPAPPTPLK QMPVPVVAAA PCAAGNGKVV APADNCDADR DMFFDTPLLD
201: LSGCSVTPAS IAAAQINGSR VSAAPAAKPT DRGMFFQTPL LDLSGCGVTP ASIAAAQING SRVSAAPAAS HPPPPPPPPP PQILFHHQIP QQQQQKKRPL
301: EQQRPASSDN KRFHFEQKPA SEKPFHIEIP AARSGKEPEV ITFSFDNSVC TSSAATSFFT NMSSQLITMS ESSACAPASR KAAHKADDDG KCHCPKKKKP
401: REKRVVRMPA VSDKVADIPS DNYSWRKYGQ KPIKGSPHPR GYYRCSSIKD CPARKHVERC RGDAGMLIVT YENDHNHAQP LDLATLTANS EA

Best Arabidopsis Sequence Match ( AT4G24240.1 )
(BLAST)

001: MTVELMMSSY SGGGGGGDGF PAIAAAAKME DTALREAASA GIHGVEEFLK LIGQSQQPTE KSQTEITAVT DVAVNSFKKV ISLLGRSRTG HARFRRAPAS
101: TQTPFKQTPV VEEEVEVEEK KPETSSVLTK QKTEQYHGGG SAFRVYCPTP IHRRPPLSHN NNNNQNQTKN GSSSSSPPML ANGAPSTINF APSPPVSATN
201: SFMSSHRCDT DSTHMSSGFE FTNPSQLSGS RGKPPLSSAS LKRRCNSSPS SRCHCSKKRK SRVKRVIRVP AVSSKMADIP SDEFSWRKYG QKPIKGSPHP
301: RGYYKCSSVR GCPARKHVER ALDDAMMLIV TYEGDHNHAL VLETTTMNHD KTL

Arabidopsis Description

WRKY7Probable WRKY transcription factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STX0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.