Factsheet for HORVU4Hr1G082550.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G320200.1	Wheat	nucleus	71.54	62.86
TraesCS5A01G495800.1	Wheat	nucleus	75.2	62.71
TraesCS4D01G320000.1	Wheat	nucleus	72.36	59.73
HORVU1Hr1G092360.1	Barley	nucleus	44.72	41.04
Zm00001d009698_P001	Maize	nucleus	42.28	29.97
KXG22622	Sorghum	nucleus	42.28	28.57
HORVU3Hr1G055910.5	Barley	plastid	44.31	24.66
HORVU3Hr1G071750.1	Barley	nucleus	24.39	21.35
GSMUA_Achr5P09430_001	Banana	nucleus	27.24	19.71
GSMUA_Achr9P05460_001	Banana	nucleus	28.86	19.51
HORVU3Hr1G069320.3	Barley	nucleus	22.76	18.86
GSMUA_Achr1P05010_001	Banana	nucleus	27.64	18.43
HORVU5Hr1G124320.1	Barley	nucleus	25.2	17.51
GSMUA_Achr6P31840_001	Banana	nucleus	27.24	17.4
HORVU7Hr1G080950.1	Barley	nucleus, plastid	28.46	17.2
HORVU5Hr1G092770.2	Barley	mitochondrion	20.73	17.06
HORVU4Hr1G012580.5	Barley	nucleus, plastid	10.57	16.99
HORVU1Hr1G051260.3	Barley	nucleus	25.2	16.53
HORVU5Hr1G015120.1	Barley	nucleus	19.92	16.23
HORVU2Hr1G102740.3	Barley	nucleus	20.33	16.03
HORVU5Hr1G094050.1	Barley	nucleus	21.54	13.42
HORVU4Hr1G011590.2	Barley	nucleus, plastid	21.54	12.86
HORVU5Hr1G122800.4	Barley	plastid	13.01	12.4
HORVU5Hr1G052630.2	Barley	plastid	12.6	12.3
HORVU5Hr1G106570.3	Barley	nucleus	20.33	10.16
HORVU3Hr1G039500.1	Barley	plastid	13.01	10.09
HORVU3Hr1G097420.1	Barley	nucleus	13.01	10.03
HORVU6Hr1G067680.3	Barley	nucleus	20.33	8.91
CDY72268	Canola	cytosol, plastid	3.66	8.74

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A287PWI1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU4Hr1G082550	EnsemblPlants:HORVU4Hr1G082550.2	InterPro:IPR003657	InterPro:IPR036576
PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF23	SMART:SM00774	SUPFAM:SSF118290
UniParc:UPI000B4829A0	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr4H:-:622602029..622603188

Molecular Weight (calculated)

26099.1 Da

IEP (calculated)

10.655

GRAVY (calculated)

-0.406

Length

246 amino acids

Sequence
(BLAST)

001: APKSTTLSSP LLSSASAKLI MDSGDWGLEA VVRSCGGSTV VPGSEAEPEP PAARARRGVA ARVEFVGQRM KVAASSSLYD VLEVPQPPFS ITPSSASHER
101: SMFFSLLSAS TSRQTLPGRK QAGRKPGAGA PTPRRPKRSS KKNVVRLVPV ADGGVNNSTV DDLWAWRKYG QKPIKGSPHP RAYYKCSSLR ACTARKLVDR
201: SPAEPEALIV TYIDDHCHAV PVLINTLAGT AHHPPKSPRG TTASGE

Best Arabidopsis Sequence Match ( AT4G23550.1 )
(BLAST)

001: MGEVAYMDEG DLEAIVRGYS GSGDAFSGES SGTFSPSFCL PMETSSFYEP EMETSGLDEL GELYKPFYPF STQTILTSSV SLPEDSKPFR DDKKQRSHGC
101: LLSNGSRADH IRISESKSKK SKKNQQKRVV EQVKEENLLS DAWAWRKYGQ KPIKGSPYPR SYYRCSSSKG CLARKQVERN PQNPEKFTIT YTNEHNHELP
201: TRRNSLAGST RAKTSQPKPT LTKKSEKEVV SSPTSNPMIP SADESSVAVQ EMSVAETSTH QAAGAIEGRR LSNGLPSDLM SGSGTFPSFT GDFDELLNSQ
301: EFFSGYLWNY

Arabidopsis Description

WRKY29WRKY29 [Source:UniProtKB/TrEMBL;Acc:A0A178V2E9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.