Factsheet for HORVU3Hr1G039500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU1Hr1G040980.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24570.1	HORVU0Hr1G001280.1	AT3G56800.1	15733871
AT2G24570.1	HORVU2Hr1G016740.4	AT3G56800.1	15733871
AT2G24570.1	HORVU3Hr1G038010.1	AT3G56800.1	15733871
AT2G24570.1	HORVU3Hr1G079210.4	AT3G56800.1	15733871
AT2G24570.1	HORVU4Hr1G026290.3	AT3G56800.1	15733871
AT2G24570.1	HORVU5Hr1G014060.1	AT3G56800.1	15733871
AT2G24570.1	HORVU5Hr1G014070.2	AT3G56800.1	15733871
AT2G24570.1	HORVU5Hr1G044710.4	AT3G56800.1	15733871
AT2G24570.1	HORVU1Hr1G040980.1	AT5G28900.1	21798944
AT4G31550.1	HORVU0Hr1G001280.1	AT3G56800.1	15733871
AT4G31550.1	HORVU2Hr1G016740.4	AT3G56800.1	15733871
AT4G31550.1	HORVU3Hr1G038010.1	AT3G56800.1	15733871
AT4G31550.1	HORVU3Hr1G079210.4	AT3G56800.1	15733871
AT4G31550.1	HORVU4Hr1G026290.3	AT3G56800.1	15733871
AT4G31550.1	HORVU5Hr1G014060.1	AT3G56800.1	15733871
AT4G31550.1	HORVU5Hr1G014070.2	AT3G56800.1	15733871
AT4G31550.1	HORVU5Hr1G044710.4	AT3G56800.1	15733871

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G012580.5	Barley	nucleus, plastid	47.0	97.39
HORVU5Hr1G052630.2	Barley	plastid	66.88	84.13
HORVU5Hr1G122800.4	Barley	plastid	48.9	60.08
TraesCS2B01G454300.1	Wheat	nucleus	49.53	50.16
TraesCS2D01G431000.1	Wheat	nucleus	49.53	48.46
TraesCS2A01G433000.1	Wheat	nucleus	49.21	47.56
Zm00001d002405_P001	Maize	nucleus	43.85	46.64
EES11384	Sorghum	nucleus	44.8	45.08
Zm00001d026252_P001	Maize	nucleus	43.85	43.99
Os04t0605100-01	Rice	nucleus	42.59	43.69
HORVU5Hr1G092770.2	Barley	mitochondrion	32.81	34.78
HORVU5Hr1G015120.1	Barley	nucleus	32.18	33.77
KRH61946	Soybean	nucleus, plastid	27.44	31.18
KRH37367	Soybean	nucleus	27.76	29.73
KRH12362	Soybean	nucleus	27.13	29.35
KRH52606	Soybean	nucleus	27.76	29.33
CDX68763	Canola	nucleus	27.13	28.86
CDY60852	Canola	nucleus	26.5	28.19
CDY23304	Canola	nucleus	27.13	28.1
CDY20325	Canola	nucleus	24.92	27.92
VIT_04s0069g00920.t01	Wine grape	nucleus	29.65	27.81
AT2G24570.1	Thale cress	nucleus	28.08	27.73
KRH16144	Soybean	nucleus	27.44	27.53
CDX72310	Canola	nucleus	24.61	27.46
KRH04945	Soybean	nucleus	27.13	27.22
GSMUA_Achr6P03810_001	Banana	nucleus	21.77	26.85
Bra023998.1-P	Field mustard	nucleus	27.76	26.83
CDY45583	Canola	nucleus	27.44	26.77
AT4G31550.1	Thale cress	nucleus	27.44	26.77
CDY13441	Canola	nucleus	24.61	26.62
Bra011282.1-P	Field mustard	nucleus	26.81	26.4
Solyc08g006320.2.1	Tomato	nucleus	27.13	26.22
Bra010231.1-P	Field mustard	nucleus	27.44	26.2
Bra032084.1-P	Field mustard	nucleus	26.81	26.15
PGSC0003DMT400024632	Potato	nucleus	27.44	26.05
CDY36432	Canola	nucleus	22.71	25.53
PGSC0003DMT400075531	Potato	nucleus	24.29	24.68
Solyc12g096350.1.1	Tomato	nucleus	22.71	21.3
HORVU3Hr1G097420.1	Barley	nucleus	21.14	21.0
HORVU4Hr1G011590.2	Barley	nucleus, plastid	24.29	18.69
HORVU5Hr1G094050.1	Barley	nucleus	19.24	15.44
HORVU1Hr1G092360.1	Barley	nucleus	11.04	13.06
HORVU4Hr1G082550.2	Barley	nucleus	10.09	13.01
HORVU5Hr1G106570.3	Barley	nucleus	19.24	12.4
HORVU3Hr1G071750.1	Barley	nucleus	9.78	11.03
HORVU5Hr1G124320.1	Barley	nucleus	11.67	10.45
HORVU3Hr1G069320.3	Barley	nucleus	9.46	10.1
HORVU7Hr1G080950.1	Barley	nucleus, plastid	12.93	10.07
HORVU3Hr1G055910.5	Barley	plastid	13.56	9.73
HORVU1Hr1G051260.3	Barley	nucleus	11.36	9.6
HORVU2Hr1G102740.3	Barley	nucleus	8.52	8.65
HORVU6Hr1G067680.3	Barley	nucleus	9.78	5.53

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A287KU09	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU3Hr1G039500	EnsemblPlants:HORVU3Hr1G039500.1	InterPro:IPR003657	InterPro:IPR036576
PFAM:PF03106	PFAM:PF10533	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF32	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000B47F1F1	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	InterPro:Zn-cluster-dom	SEG:seg

Description

No Description!

Coordinates

chrchr3H:+:233580657..233584711

Molecular Weight (calculated)

33832.3 Da

IEP (calculated)

12.101

GRAVY (calculated)

-0.734

Length

317 amino acids

Sequence
(BLAST)

001: QKDRRSSPLS HVPSQPSSAR LKKRKQPQPS PVTRPLSQSA PPLAPDPFSL SISSEQSSPP PRPQSCATMN CPSHRHRAPA SVAVTQPVHA ALVRPARLHH
101: RKRRLFQGAA AAAPAAVRRD RRPGHLQVPQ GDLHPRPHRP RPLPPRPHPV TAGAAPALSL IHXSMAAPVP QPQSLTLDFT KPNLTMSGAT SVTSTSFFSS
201: VTAAEGSVSK GRSLVSAGKP PLSGHKRKPC AGAHSEANTT GSRCHCSKRR KNRVKTTVRV PAVSAKIADI PPDEYSWRKY GQKPIKGSPY PRSSEAPPMS
301: GQQTSASFGG ERDLWGP

Best Arabidopsis Sequence Match ( AT4G31550.1 )
(BLAST)

001: MAVDLMRFPK IDDQTAIQEA ASQGLQSMEH LIRVLSNRPE QQHNVDCSEI TDFTVSKFKT VISLLNRTGH ARFRRGPVHS TSSAASQKLQ SQIVKNTQPE
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA

Arabidopsis Description

WRKY11Probable WRKY transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV15]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.