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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
MultiLoc:cytosol
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G009910.2
HORVU1Hr1G035960.19
HORVU2Hr1G011420.1
HORVU2Hr1G011430.8
HORVU2Hr1G011470.1
HORVU2Hr1G011490.1
HORVU2Hr1G011530.1
HORVU3Hr1G036290.3
HORVU3Hr1G036310.2
HORVU3Hr1G039500.1
HORVU3Hr1G079290.1
HORVU3Hr1G097420.1
HORVU3Hr1G114320.1
HORVU3Hr1G114440.21
HORVU4Hr1G012580.5
HORVU4Hr1G063490.1
HORVU4Hr1G063610.1
HORVU5Hr1G015120.1
HORVU5Hr1G052630.2
HORVU5Hr1G060800.2
HORVU5Hr1G092770.2
HORVU5Hr1G092920.4
HORVU5Hr1G095410.1
HORVU5Hr1G122800.4
HORVU6Hr1G018670.1
HORVU6Hr1G075650.1
HORVU6Hr1G075950.4
HORVU7Hr1G038130.1
HORVU7Hr1G038420.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G28900.1 HORVU5Hr1G060800.2 AT1G14900.1 21798944
AT5G28900.1 HORVU5Hr1G095410.1 AT1G14900.1 21798944
AT5G28900.1 HORVU3Hr1G114440.21 AT1G15570.1 21798944
AT5G28900.1 HORVU0Hr1G009910.2 AT1G30120.1 21798944
AT5G28900.1 HORVU5Hr1G092920.4 AT1G30120.1 21798944
AT5G28900.1 HORVU3Hr1G036290.3 AT1G75400.1 21798944
AT5G28900.1 HORVU3Hr1G036310.2 AT1G75400.1 21798944
AT5G28900.1 HORVU1Hr1G035960.19 AT3G01180.1 21798944
AT5G28900.1 HORVU6Hr1G075950.4 AT3G01180.1 21798944
AT5G28900.1 HORVU7Hr1G038420.1 AT3G01180.1 21798944
AT5G28900.1 HORVU6Hr1G075650.1 AT3G47620.1 21798944
AT5G28900.1 HORVU7Hr1G038130.1 AT3G47620.1 21798944
AT5G28900.1 HORVU3Hr1G079290.1 AT3G60360.1 21798944
AT5G28900.1 HORVU3Hr1G039500.1 AT4G31550.1 21798944
AT5G28900.1 HORVU3Hr1G097420.1 AT4G31550.1 21798944
AT5G28900.1 HORVU4Hr1G012580.5 AT4G31550.1 21798944
AT5G28900.1 HORVU5Hr1G015120.1 AT4G31550.1 21798944
AT5G28900.1 HORVU5Hr1G052630.2 AT4G31550.1 21798944
AT5G28900.1 HORVU5Hr1G092770.2 AT4G31550.1 21798944
AT5G28900.1 HORVU5Hr1G122800.4 AT4G31550.1 21798944
AT5G28900.1 HORVU2Hr1G011420.1 AT4G38770.1 21798944
AT5G28900.1 HORVU2Hr1G011430.8 AT4G38770.1 21798944
AT5G28900.1 HORVU2Hr1G011470.1 AT4G38770.1 21798944
AT5G28900.1 HORVU2Hr1G011490.1 AT4G38770.1 21798944
AT5G28900.1 HORVU2Hr1G011530.1 AT4G38770.1 21798944
AT5G28900.1 HORVU3Hr1G114320.1 AT4G38770.1 21798944
AT5G28900.1 HORVU4Hr1G063490.1 AT4G38770.1 21798944
AT5G28900.1 HORVU4Hr1G063610.1 AT4G38770.1 21798944
AT5G28900.1 HORVU6Hr1G018670.1 AT4G38770.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G153900.1 Wheat cytosol 99.26 99.26
TraesCS1D01G152300.1 Wheat cytosol 99.08 99.08
TraesCS1B01G171200.1 Wheat cytosol 98.89 98.89
Os10t0476600-01 Rice cytosol, plasma membrane, plastid 93.16 93.16
EER94083 Sorghum cytosol 92.24 92.24
Zm00001d032708_P009 Maize cytosol 90.94 91.11
KRG92395 Soybean cytosol 14.23 90.59
GSMUA_Achr8P19010_001 Banana cytosol 53.97 89.02
Zm00001d014037_P004 Maize cytosol 90.76 85.54
KRG92392 Soybean cytosol 18.48 85.47
KRG97049 Soybean cytosol 53.23 84.96
CDY71370 Canola extracellular 36.04 81.25
KRH62662 Soybean cytosol 7.95 81.13
GSMUA_AchrUn_... Banana cytosol 80.78 80.63
GSMUA_Achr11P... Banana cytosol 80.59 80.59
KRG92396 Soybean cytosol 11.28 79.22
KRH68797 Soybean cytosol 75.23 75.79
KRH34156 Soybean cytosol 74.31 74.86
VIT_07s0005g03730.t01 Wine grape cytosol 75.6 74.77
KRG92626 Soybean cytosol 74.12 74.67
Solyc04g010070.2.1 Tomato plastid 73.2 73.47
CDY48668 Canola cytosol 72.27 72.68
CDX86212 Canola cytosol 72.27 72.68
Bra010012.1-P Field mustard cytosol 72.27 72.68
Solyc05g054980.2.1 Tomato cytosol 72.27 72.54
KRH34399 Soybean cytosol 71.72 71.72
AT5G28900.1 Thale cress cytosol 70.79 71.46
AT5G28850.2 Thale cress cytosol 70.79 71.46
CDY57012 Canola cytosol 70.79 71.32
Bra036126.1-P Field mustard cytosol 70.79 71.32
AT1G54450.1 Thale cress cytosol 70.43 71.22
Bra021340.1-P Field mustard cytosol 70.43 70.56
CDY44814 Canola cytosol 70.43 70.56
AT1G03960.1 Thale cress cytosol 68.58 70.13
CDY00020 Canola cytosol 70.06 70.06
CDY13127 Canola cytosol 68.76 69.92
Bra027527.1-P Field mustard cytosol 68.39 69.42
CDY36971 Canola cytosol 67.84 69.25
CDX86655 Canola cytosol 66.54 68.31
Bra030551.1-P Field mustard cytosol 67.47 68.1
CDY15483 Canola cytosol 66.91 67.79
HORVU6Hr1G034840.3 Barley cytosol 63.03 63.5
AT5G44090.2 Thale cress endoplasmic reticulum, extracellular 66.36 62.65
KRG97048 Soybean nucleus 21.81 59.9
VIT_14s0036g00730.t01 Wine grape extracellular 20.33 59.78
VIT_14s0036g00750.t01 Wine grape cytosol 56.56 58.96
KRG92401 Soybean cytosol, plastid 16.27 55.7
KRG92399 Soybean cytosol 2.96 48.48
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.238.220Gene3D:1.10.238.230MapMan:18.4.24.1.2.4EMBL:AK360499EMBL:AK364391
InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domUniProt:F2D9D7GO:GO:0003674GO:GO:0005488
GO:GO:0005509EnsemblPlantsGene:HORVU1Hr1G040980EnsemblPlants:HORVU1Hr1G040980.1InterPro:IPR002048PFAM:PF13499PFAM:PF13833
ScanProsite:PS00018PFscan:PS50222PANTHER:PTHR14095PANTHER:PTHR14095:SF7SUPFAM:SSF47473UniParc:UPI0002005840
SEG:seg:::::
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D9D7]
Coordinates
chrchr1H:-:290021845..290032704
Molecular Weight (calculated)
62010.6 Da
IEP (calculated)
4.648
GRAVY (calculated)
-0.361
Length
541 amino acids
Sequence
(BLAST)
001: MEVEAARRDA SALDPELLQL PELAPGALRE NSSIAEALYF QWLVLPESSK LVKSLIEDAK AGATLNVAGS SASTNAASSS SLPSMFPAGS APPLSPRSTA
101: GSPRVMRRGS SAGPSSLGSP LKLVSEPVRE VIPQFYFKHG RPPPKDLREQ CLSRLDHLFF AGEGLQIQEF RPVIKDICKL PSYLSGVLFK KIDAACSGTV
201: TRDAFIDYWF NDNKITMDTA SQIFEILRKP GYSYLTQEDF KPVLKELLAT HPGLEFLQGT PEFQDRYAET VIYRIFYSIN RSGNGHLTLR ELKRGNLVAA
301: MQQLDEEEDI NKILRYFSYE HFYVIYCKFW ELDTDHDFLI DKENLIRYGN HSLTYRIVDR VFSQVPRKFT SMTEGKMGYE DFVYFILSEE DKSSEPSLEY
401: WFKCIDLDGN GILTTNEMQF FYEEQLHRME CMAQEPVLFE DILCQMIDMI GPENETYFTL RDLKRCKLSG NIFNILFNLN KFMAFETRDP FLIRQERENP
501: TLTEWDRFAH REYIRLSMEE DGEDASNGSG DVWDESLEAP F
Best Arabidopsis Sequence Match ( AT1G54450.1 )
(BLAST)
001: MESITLDIEL LQLPETSPMS MKSNQDFVKK LFDQWLALPE TNRLVTSLVN DAKAGVALNV MCGGGSSGTN SGSNSPLASM FPARNGPPLS PRNSTGSPRI
101: ARQRTGLSNL SSPLKVVSDH VKELIPQFYF EDGRPPPNDL KEQCIAKINS LFYGHEDGLQ LQEFKLVTTE ICKVPSFFST SIFKKVDTNN TGFVKREDFI
201: DYWVKGNMLT KEITSQVFTI LKQPDHNYLV QDDFKPVLQE LLATHPGLEF LQGTPEFQDR YAETVIYRIY YYINRSGNGH LTLRELKRGN LVDAMQHADE
301: EEDINKVLRY FSYEHFYVIY CKFWELDTDH DFLIDKENLI RYSNHALTYR IVDRIFSQVP RKFTSKTEGK MGYEDFVYFI LAEEDKSSEP SLEYWFKCID
401: LDANGVLTRN ELQFFYEEQL HRMECMAQEA VLFEDILCQL FDMVKPEDEG FICLNDLKGS KLSGNVFNIL FNLNKFMAFE TRDPFLIRQE RANPTWTEWD
501: RFAHREYIRL SMEEDVEDAS NGSAEAWDDS LEVPF
Arabidopsis Description
B''DELTAProbable serine/threonine protein phosphatase 2A regulatory subunit B''delta [Source:UniProtKB/Swiss-Prot;Acc:Q9SLI8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.