Factsheet for HORVU5Hr1G092920.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G000140.4
HORVU4Hr1G006930.1
HORVU4Hr1G087520.3
HORVU5Hr1G060730.3
HORVU6Hr1G075650.1
HORVU7Hr1G038130.1
HORVU7Hr1G052520.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G30120.1	HORVU4Hr1G006930.1	AT1G14920.1	21798944
AT1G30120.1	HORVU3Hr1G000140.4	AT1G70340.1	21798944
AT1G30120.1	HORVU4Hr1G087520.3	AT3G17860.1	21798944
AT1G30120.1	HORVU5Hr1G060730.3	AT3G17860.1	21798944
AT1G30120.1	HORVU7Hr1G052520.1	AT3G21140.1	21798944
AT1G30120.1	HORVU6Hr1G075650.1	AT3G47620.1	21798944
AT1G30120.1	HORVU7Hr1G038130.1	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0645100-01	Rice	plastid	67.31	95.72
CDX90227	Canola	cytosol, mitochondrion, peroxisome	36.56	91.4
Bra032361.1-P	Field mustard	cytosol, mitochondrion, peroxisome	58.92	89.25
TraesCS5A01G374500.1	Wheat	plastid	74.41	88.04
TraesCS5D01G384100.1	Wheat	golgi	74.41	88.04
TraesCS5B01G376400.1	Wheat	plastid	74.19	87.79
Zm00001d033225_P002	Maize	plastid	71.61	86.95
EER93752	Sorghum	plastid	72.26	86.82
HORVU0Hr1G009910.2	Barley	plastid	66.67	78.68
VIT_10s0003g03770.t01	Wine grape	plastid	64.52	76.73
CDY54115	Canola	mitochondrion, peroxisome, plastid	9.89	75.41
KRH05520	Soybean	plastid	64.95	74.94
KRH58644	Soybean	nucleus	64.52	74.07
GSMUA_Achr5P02560_001	Banana	plastid	58.92	73.85
Solyc08g016750.2.1	Tomato	plastid	64.52	73.53
Solyc04g008590.2.1	Tomato	plastid	64.52	73.53
VIT_04s0043g00720.t01	Wine grape	plastid	63.87	73.33
KRH42550	Soybean	plastid	63.87	73.15
CDY51472	Canola	plastid	57.2	72.88
KRH15497	Soybean	plastid	63.44	72.84
Bra010796.1-P	Field mustard	plastid	63.01	72.7
GSMUA_Achr2P12960_001	Banana	vacuole	9.68	72.58
CDY63670	Canola	plastid	62.8	72.46
AT2G34590.1	Thale cress	plastid	63.23	72.41
PGSC0003DMT400019358	Potato	plastid	64.73	72.18
AT1G30120.1	Thale cress	plastid	63.01	72.17
GSMUA_Achr4P31470_001	Banana	mitochondrion	39.78	70.88
PGSC0003DMT400080554	Potato	plastid	63.87	68.12
CDY54117	Canola	cytosol	16.56	66.38
CDY26291	Canola	plastid	44.52	65.71
CDY54116	Canola	cytosol	3.87	45.0
CDX90228	Canola	plastid	10.75	37.59
HORVU7Hr1G055090.3	Barley	mitochondrion	29.89	37.57
HORVU5Hr1G077200.2	Barley	mitochondrion, plastid	33.33	35.96
HORVU6Hr1G017000.1	Barley	cytosol, mitochondrion	9.68	35.71
HORVU6Hr1G006560.2	Barley	mitochondrion	24.09	30.11
HORVU5Hr1G114960.1	Barley	cytosol	12.9	29.27
HORVU3Hr1G031230.1	Barley	mitochondrion, peroxisome, plastid	9.25	27.39
HORVU6Hr1G037690.1	Barley	plastid	9.89	27.38
HORVU1Hr1G025150.1	Barley	mitochondrion, nucleus, peroxisome	7.74	22.93

Protein Annotations

Gene3D:3.40.50.920	Gene3D:3.40.50.970	MapMan:5.1.2.2.1.2	UniProt:A0A287S9G2	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	EnsemblPlantsGene:HORVU5Hr1G092920	EnsemblPlants:HORVU5Hr1G092920.4	InterPro:IPR009014	PFAM:PF02779
PFAM:PF02780	PANTHER:PTHR11624	PANTHER:PTHR11624:SF93	SMART:SM00861	SUPFAM:SSF52518	SUPFAM:SSF52922
InterPro:THDP-binding	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_C	UniParc:UPI000B4806D0	SEG:seg

Description

No Description!

Coordinates

chrchr5H:+:589784648..589788121

Molecular Weight (calculated)

49872.2 Da

IEP (calculated)

7.364

GRAVY (calculated)

-0.147

Length

465 amino acids

Sequence
(BLAST)

001: RPHHQPLSVS PLPSPPRASF TPPPSPPFLR HRQPTCIPPK PTTPSINKYA HAYTPLPPPP PPQPPDLDPP SAMAAASSLH VAAPAATPRV GSAGPKSASG
101: TRSVRVARSG AGARPGGRLV ACAAVATKAD APASEAASKS EGHEVLLFEA LREGLMEEMQ ADPTVCVFGE DVGHYGGSYK VTKGLADMFG DLRVLDTPIA
201: ENSFTGMGVG AGMKGLRPVI EGMNMGFLLL AYNQISNNCG MLHYTSGGQF KIPLVIRGPG GVGRQLGAEH SQRLESYFQS IPGLQMVACS TPYNAKGLMK
301: AAIRSENPVV LFEHVLLYNL KEKIPDEEYT LCLEEAEMVR PGEHVTILTY SRMRYHVMQA AKTLVNKGYD PEVIDIRSLK PFDLHTIGNS IKKTHRVLIV
401: EECMRTGGIG ASLRSAIIDN FWDYLDAPIM CLSSQDVPTP YAATLEDATV VQPAQIVAAV EQICQ

Best Arabidopsis Sequence Match ( AT2G34590.1 )
(BLAST)

001: MSAILQGAGA ATALSPFNSI DSNKLVAPSR SSLSVRSKRY IVAGSDSKSF GSSLVARRSE PLIPNAVTTK ADTAASSTSS KPGHELLLFE ALQEGLEEEM
101: DRDPHVCVMG EDVGHYGGSY KVTKGLADKF GDLRVLDTPI CENAFTGMGI GAAMTGLRPV IEGMNMGFLL LAFNQISNNC GMLHYTSGGQ FTIPVVIRGP
201: GGVGRQLGAE HSQRLESYFQ SIPGIQMVAC STPYNAKGLM KAAIRSENPV ILFEHVLLYN LKESIPDEEY ICNLEEAEMV RPGEHITILT YSRMRYHVMQ
301: AAKTLVNKGY DPEVIDIRSL KPFDLYTIGN SVKKTHRVLI VEECMRTGGI GASLTAAINE NFHDYLDAPV MCLSSQDVPT PYAGTLEEWT VVQPAQIVTA
401: VEQLCQ

Arabidopsis Description

E1-BETA-2Pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64688]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.