Factsheet for HORVU6Hr1G006560.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G036000.1	Wheat	mitochondrion	93.55	94.05
HORVU6Hr1G017000.1	Barley	cytosol, mitochondrion	31.72	93.65
TraesCS6D01G041600.1	Wheat	mitochondrion	93.01	92.76
TraesCS6B01G050600.1	Wheat	mitochondrion	67.74	90.0
Zm00001d007892_P001	Maize	mitochondrion	83.6	85.67
Os07t0170100-01	Rice	mitochondrion	84.95	85.41
EER98039	Sorghum	mitochondrion	83.87	84.55
AT1G55510.1	Thale cress	mitochondrion	75.54	79.83
AT3G13450.1	Thale cress	mitochondrion	75.27	78.21
KRH75712	Soybean	mitochondrion	74.73	78.09
KRH65916	Soybean	mitochondrion	75.0	77.93
VIT_06s0004g00190.t01	Wine grape	mitochondrion	75.0	77.93
Solyc01g028900.2.1	Tomato	plastid	74.73	77.65
GSMUA_Achr8P20340_001	Banana	mitochondrion	77.69	77.07
HORVU5Hr1G114960.1	Barley	cytosol	41.94	76.1
CDY10556	Canola	mitochondrion	73.39	75.41
CDY02436	Canola	mitochondrion	72.04	68.37
Bra030856.1-P	Field mustard	mitochondrion	66.94	65.7
HORVU3Hr1G031230.1	Barley	mitochondrion, peroxisome, plastid	26.61	63.06
HORVU6Hr1G037690.1	Barley	plastid	26.61	58.93
HORVU1Hr1G025150.1	Barley	mitochondrion, nucleus, peroxisome	23.92	56.69
HORVU7Hr1G055090.3	Barley	mitochondrion	31.18	31.35
HORVU5Hr1G077200.2	Barley	mitochondrion, plastid	33.06	28.54
HORVU0Hr1G009910.2	Barley	plastid	30.11	28.43
HORVU5Hr1G092920.4	Barley	plastid	30.11	24.09

Protein Annotations

Gene3D:3.40.50.920	Gene3D:3.40.50.970	MapMan:4.2.7.2.1.2	UniProt:A0A287T8G0	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	EnsemblPlantsGene:HORVU6Hr1G006560	EnsemblPlants:HORVU6Hr1G006560.2	InterPro:IPR009014	PFAM:PF02779
PFAM:PF02780	PANTHER:PTHR42980	PANTHER:PTHR42980:SF1	SMART:SM00861	SUPFAM:SSF52518	SUPFAM:SSF52922
InterPro:THDP-binding	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_C	UniParc:UPI000B4714A7	SEG:seg

Description

No Description!

Coordinates

chrchr6H:-:14070591..14075205

Molecular Weight (calculated)

39972.9 Da

IEP (calculated)

6.771

GRAVY (calculated)

0.042

Length

372 amino acids

Sequence
(BLAST)

001: MATRALREVV VRRRVGAAGI VGGRRFSDTA AAAAAAPAGA AERGDGGAGK AVNLFTAVNQ ALHIALDTDP RSYVFGEDVG FGGVFRCTTG LAERFGKQRV
101: FNTPLCEQGI AGFAIGLAAM DNRAIAEIQF ADYIFPAFDQ IVNEAAKFRY RSGNEFNCGG LTIRSPYGAV GHGGHYHSQS PEAFFCHVPG LKVVIPRSPR
201: EAKGLLLASI RDPNPVIFFE PKWLYRLAVE EVPEGDYMLP LSQAEVIRKG SDITLVGWGA QLAVLAQACE DASKDGISCE LIDLRTLIPW DKETVEASVS
301: KTGKLLVSHE APVTGGFGAE IAASIAERCF QRLEAPVARV CGLDTPFPLV YEQFYMPTKN KIVDAIKATV NY

Best Arabidopsis Sequence Match ( AT1G55510.1 )
(BLAST)

001: MAALLGRSCR KLSFPSLSHG ARRVSTETGK PLNLYSAINQ ALHIALDTDP RSYVFGEDVG FGGVFRCTTG LAERFGKNRV FNTPLCEQGI VGFGIGLAAM
101: GNRAIVEIQF ADYIYPAFDQ IVNEAAKFRY RSGNQFNCGG LTIRAPYGAV GHGGHYHSQS PEAFFCHVPG IKVVIPRSPR EAKGLLLSCI RDPNPVVFFE
201: PKWLYRQAVE EVPEHDYMIP LSEAEVIREG NDITLVGWGA QLTVMEQACL DAEKEGISCE LIDLKTLLPW DKETVEASVK KTGRLLISHE APVTGGFGAE
301: ISATILERCF LKLEAPVSRV CGLDTPFPLV FEPFYMPTKN KILDAIKSTV NY

Arabidopsis Description

BCDH BETA12-oxoisovalerate dehydrogenase subunit beta 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SAV3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.