Factsheet for HORVU6Hr1G037690.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G017000.1	Barley	cytosol, mitochondrion	29.17	38.89
TraesCS6B01G050600.1	Wheat	mitochondrion	56.55	33.93
Zm00001d007892_P001	Maize	mitochondrion	58.33	27.0
AT1G55510.1	Thale cress	mitochondrion	56.55	26.99
AT3G13450.1	Thale cress	mitochondrion	57.14	26.82
Solyc01g028900.2.1	Tomato	plastid	57.14	26.82
HORVU6Hr1G006560.2	Barley	mitochondrion	58.93	26.61
KRH65916	Soybean	mitochondrion	56.55	26.54
Os07t0170100-01	Rice	mitochondrion	58.33	26.49
KRH75712	Soybean	mitochondrion	55.95	26.4
EER98039	Sorghum	mitochondrion	57.74	26.29
TraesCS6A01G036000.1	Wheat	mitochondrion	57.74	26.22
TraesCS6D01G041600.1	Wheat	mitochondrion	57.74	26.01
VIT_06s0004g00190.t01	Wine grape	mitochondrion	54.17	25.42
CDY10556	Canola	mitochondrion	54.76	25.41
GSMUA_Achr8P20340_001	Banana	mitochondrion	54.76	24.53
Bra030856.1-P	Field mustard	mitochondrion	54.17	24.01
CDY02436	Canola	mitochondrion	54.76	23.47
HORVU5Hr1G114960.1	Barley	cytosol	22.02	18.05
HORVU7Hr1G055090.3	Barley	mitochondrion	23.21	10.54
HORVU5Hr1G077200.2	Barley	mitochondrion, plastid	26.19	10.21
HORVU0Hr1G009910.2	Barley	plastid	23.81	10.15
HORVU5Hr1G092920.4	Barley	plastid	27.38	9.89
HORVU3Hr1G031230.1	Barley	mitochondrion, peroxisome, plastid	2.38	2.55
HORVU1Hr1G025150.1	Barley	mitochondrion, nucleus, peroxisome	2.38	2.55

Protein Annotations

EnsemblPlants:HORVU6Hr1G037690.1	EnsemblPlantsGene:HORVU6Hr1G037690	Gene3D:3.40.50.970	InterPro:THDP-binding	InterPro:Transketolase-like_Pyr-bd	PANTHER:PTHR42980
PANTHER:PTHR42980:SF1	PFAM:PF02779	SEG:seg	SMART:SM00861	SUPFAM:SSF52518	UniParc:UPI000B466958
UniProt:A0A287TYF4	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:190250093..190253073

Molecular Weight (calculated)

18603.2 Da

IEP (calculated)

10.011

GRAVY (calculated)

-0.161

Length

168 amino acids

Sequence
(BLAST)

001: LVLSTGSAPS YAPAALILCR RRRPGPAQAG PPPSVANKEL HIALDTDPRS YVFGEDVGFG GVFRCTTRLA ERFGKQRVFN TPLCEQGIAR FAIGLAAIDN
101: RTIAEIQFAD YIFPAFDQIV NEAAKFRYRS GNEFNYGGNH FSLQKKKLFN NSISIWSHQR LSSAMFLA

Best Arabidopsis Sequence Match ( AT1G55510.1 )
(BLAST)

001: MAALLGRSCR KLSFPSLSHG ARRVSTETGK PLNLYSAINQ ALHIALDTDP RSYVFGEDVG FGGVFRCTTG LAERFGKNRV FNTPLCEQGI VGFGIGLAAM
101: GNRAIVEIQF ADYIYPAFDQ IVNEAAKFRY RSGNQFNCGG LTIRAPYGAV GHGGHYHSQS PEAFFCHVPG IKVVIPRSPR EAKGLLLSCI RDPNPVVFFE
201: PKWLYRQAVE EVPEHDYMIP LSEAEVIREG NDITLVGWGA QLTVMEQACL DAEKEGISCE LIDLKTLLPW DKETVEASVK KTGRLLISHE APVTGGFGAE
301: ISATILERCF LKLEAPVSRV CGLDTPFPLV FEPFYMPTKN KILDAIKSTV NY

Arabidopsis Description

BCDH BETA12-oxoisovalerate dehydrogenase subunit beta 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SAV3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.