Factsheet for HORVU3Hr1G031230.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid

Predictor Summary:

mitochondrion 2
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome, plastid
Any Predictor:	mitochondrion, peroxisome, plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G025150.1	Barley	mitochondrion, nucleus, peroxisome	85.35	85.35
HORVU5Hr1G114960.1	Barley	cytosol	87.9	67.32
HORVU6Hr1G017000.1	Barley	cytosol, mitochondrion	29.94	37.3
TraesCS6B01G050600.1	Wheat	mitochondrion	58.6	32.86
TraesCS6D01G041600.1	Wheat	mitochondrion	63.69	26.81
TraesCS6A01G036000.1	Wheat	mitochondrion	63.06	26.76
HORVU6Hr1G006560.2	Barley	mitochondrion	63.06	26.61
Zm00001d007892_P001	Maize	mitochondrion	59.24	25.62
EER98039	Sorghum	mitochondrion	59.24	25.2
Os07t0170100-01	Rice	mitochondrion	59.24	25.14
AT1G55510.1	Thale cress	mitochondrion	55.41	24.72
CDY10556	Canola	mitochondrion	56.69	24.59
KRH65916	Soybean	mitochondrion	55.41	24.3
KRH75712	Soybean	mitochondrion	54.78	24.16
VIT_06s0004g00190.t01	Wine grape	mitochondrion	54.78	24.02
AT3G13450.1	Thale cress	mitochondrion	54.14	23.74
GSMUA_Achr8P20340_001	Banana	mitochondrion	56.05	23.47
Bra030856.1-P	Field mustard	mitochondrion	56.05	23.22
Solyc01g028900.2.1	Tomato	plastid	51.59	22.63
CDY02436	Canola	mitochondrion	56.05	22.45
HORVU7Hr1G055090.3	Barley	mitochondrion	33.76	14.32
HORVU5Hr1G077200.2	Barley	mitochondrion, plastid	34.39	12.53
HORVU0Hr1G009910.2	Barley	plastid	27.39	10.91
HORVU5Hr1G092920.4	Barley	plastid	27.39	9.25
HORVU6Hr1G037690.1	Barley	plastid	2.55	2.38

Protein Annotations

EnsemblPlants:HORVU3Hr1G031230.1	EnsemblPlantsGene:HORVU3Hr1G031230	Gene3D:3.40.50.920	Gene3D:3.40.50.970	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:IPR009014	InterPro:THDP-binding	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd
PANTHER:PTHR42980	PANTHER:PTHR42980:SF1	PFAM:PF02779	SUPFAM:SSF52518	UniParc:UPI000B46A7DD	UniProt:A0A287KMS2
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:153819743..153822751

Molecular Weight (calculated)

17599.5 Da

IEP (calculated)

10.034

GRAVY (calculated)

-0.134

Length

157 amino acids

Sequence
(BLAST)

001: MKLLDMVVTT IQSPEAFFCH VLGLKVVISR SPREAKGLLL ASIRDPNPVI FFEPKWLYRL SIEEVPEGDY MLPLSQAEVI RKGSDITLVG WGAQLVVLEQ
101: ACEDGSKRCR RMSCTRVRFR ESTTTGRSVG VRFTDSAVTV TKGTPQGQRR KLDTRAI

Best Arabidopsis Sequence Match ( AT1G55510.1 )
(BLAST)

001: MAALLGRSCR KLSFPSLSHG ARRVSTETGK PLNLYSAINQ ALHIALDTDP RSYVFGEDVG FGGVFRCTTG LAERFGKNRV FNTPLCEQGI VGFGIGLAAM
101: GNRAIVEIQF ADYIYPAFDQ IVNEAAKFRY RSGNQFNCGG LTIRAPYGAV GHGGHYHSQS PEAFFCHVPG IKVVIPRSPR EAKGLLLSCI RDPNPVVFFE
201: PKWLYRQAVE EVPEHDYMIP LSEAEVIREG NDITLVGWGA QLTVMEQACL DAEKEGISCE LIDLKTLLPW DKETVEASVK KTGRLLISHE APVTGGFGAE
301: ISATILERCF LKLEAPVSRV CGLDTPFPLV FEPFYMPTKN KILDAIKSTV NY

Arabidopsis Description

BCDH BETA12-oxoisovalerate dehydrogenase subunit beta 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SAV3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.