Factsheet for HORVU1Hr1G025150.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, nucleus

Predictor Summary:

peroxisome 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus, peroxisome
Any Predictor:	mitochondrion, nucleus, peroxisome
MultiLoc:	peroxisome
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G031230.1	Barley	mitochondrion, peroxisome, plastid	85.35	85.35
HORVU5Hr1G114960.1	Barley	cytosol	83.44	63.9
TraesCS6B01G050600.1	Wheat	mitochondrion	51.59	28.93
HORVU6Hr1G017000.1	Barley	cytosol, mitochondrion	22.93	28.57
TraesCS6D01G041600.1	Wheat	mitochondrion	57.32	24.13
TraesCS6A01G036000.1	Wheat	mitochondrion	56.69	24.05
HORVU6Hr1G006560.2	Barley	mitochondrion	56.69	23.92
Zm00001d007892_P001	Maize	mitochondrion	52.87	22.86
EER98039	Sorghum	mitochondrion	52.87	22.49
Os07t0170100-01	Rice	mitochondrion	52.87	22.43
AT1G55510.1	Thale cress	mitochondrion	49.04	21.88
CDY10556	Canola	mitochondrion	50.32	21.82
KRH65916	Soybean	mitochondrion	49.68	21.79
VIT_06s0004g00190.t01	Wine grape	mitochondrion	49.68	21.79
KRH75712	Soybean	mitochondrion	48.41	21.35
GSMUA_Achr8P20340_001	Banana	mitochondrion	50.32	21.07
AT3G13450.1	Thale cress	mitochondrion	47.77	20.95
Bra030856.1-P	Field mustard	mitochondrion	49.68	20.58
Solyc01g028900.2.1	Tomato	plastid	45.86	20.11
CDY02436	Canola	mitochondrion	49.68	19.9
HORVU7Hr1G055090.3	Barley	mitochondrion	28.66	12.16
HORVU5Hr1G077200.2	Barley	mitochondrion, plastid	28.66	10.44
HORVU0Hr1G009910.2	Barley	plastid	22.93	9.14
HORVU5Hr1G092920.4	Barley	plastid	22.93	7.74
HORVU6Hr1G037690.1	Barley	plastid	2.55	2.38

Protein Annotations

EnsemblPlants:HORVU1Hr1G025150.1	EnsemblPlantsGene:HORVU1Hr1G025150	Gene3D:3.40.50.920	Gene3D:3.40.50.970	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:IPR009014	InterPro:THDP-binding	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd
PANTHER:PTHR42980	PANTHER:PTHR42980:SF1	PFAM:PF02779	SUPFAM:SSF52518	SUPFAM:SSF52922	UniParc:UPI000B46DB8D
UniProt:A0A287EYH6	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:120373212..120376223

Molecular Weight (calculated)

17535.2 Da

IEP (calculated)

9.339

GRAVY (calculated)

-0.275

Length

157 amino acids

Sequence
(BLAST)

001: MELLDMVVTT IHSHQRLSSA MSDLKVVIPR SPREAKGVLL ASIHDPNPVI FFEPKWLYRL SVEEVPEGDY MLPLSQAEVI HKGSDITLVG WGAQLAVLEQ
101: ACQDASKRCR RMSCTRVRFP ESTTTGRSVG DRFTDSAVTV TKGTPQGRRR KLDTRAI

Best Arabidopsis Sequence Match ( AT1G55510.1 )
(BLAST)

001: MAALLGRSCR KLSFPSLSHG ARRVSTETGK PLNLYSAINQ ALHIALDTDP RSYVFGEDVG FGGVFRCTTG LAERFGKNRV FNTPLCEQGI VGFGIGLAAM
101: GNRAIVEIQF ADYIYPAFDQ IVNEAAKFRY RSGNQFNCGG LTIRAPYGAV GHGGHYHSQS PEAFFCHVPG IKVVIPRSPR EAKGLLLSCI RDPNPVVFFE
201: PKWLYRQAVE EVPEHDYMIP LSEAEVIREG NDITLVGWGA QLTVMEQACL DAEKEGISCE LIDLKTLLPW DKETVEASVK KTGRLLISHE APVTGGFGAE
301: ISATILERCF LKLEAPVSRV CGLDTPFPLV FEPFYMPTKN KILDAIKSTV NY

Arabidopsis Description

BCDH BETA12-oxoisovalerate dehydrogenase subunit beta 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SAV3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.