Factsheet for Os07t0170100-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G017000.1	Barley	cytosol, mitochondrion	30.81	90.48
Zm00001d007892_P001	Maize	mitochondrion	85.14	86.78
TraesCS6A01G036000.1	Wheat	mitochondrion	86.22	86.22
EER98039	Sorghum	mitochondrion	85.95	86.18
HORVU6Hr1G006560.2	Barley	mitochondrion	85.41	84.95
TraesCS6D01G041600.1	Wheat	mitochondrion	85.41	84.72
AT1G55510.1	Thale cress	mitochondrion	75.95	79.83
TraesCS6B01G050600.1	Wheat	mitochondrion	60.27	79.64
KRH75712	Soybean	mitochondrion	76.49	79.49
KRH65916	Soybean	mitochondrion	75.41	77.93
AT3G13450.1	Thale cress	mitochondrion	75.41	77.93
Solyc01g028900.2.1	Tomato	plastid	75.14	77.65
VIT_06s0004g00190.t01	Wine grape	mitochondrion	75.14	77.65
GSMUA_Achr8P20340_001	Banana	mitochondrion	77.84	76.8
CDY10556	Canola	mitochondrion	74.32	75.97
HORVU5Hr1G114960.1	Barley	cytosol	40.81	73.66
CDY02436	Canola	mitochondrion	72.43	68.37
Bra030856.1-P	Field mustard	mitochondrion	66.76	65.17
HORVU3Hr1G031230.1	Barley	mitochondrion, peroxisome, plastid	25.14	59.24
HORVU6Hr1G037690.1	Barley	plastid	26.49	58.33
HORVU1Hr1G025150.1	Barley	mitochondrion, nucleus, peroxisome	22.43	52.87
Os03t0645100-01	Rice	plastid	29.19	33.03
Os08t0536000-01	Rice	mitochondrion	32.43	32.09
Os09t0509200-01	Rice	mitochondrion	31.62	31.12
Os12t0616900-01	Rice	plastid	32.16	30.43
Os09t0509300-01	Rice	plasma membrane	13.78	8.13

Protein Annotations

Gene3D:3.40.50.920	Gene3D:3.40.50.970	MapMan:4.2.7.2.1.2	EntrezGene:4342508	EMBL:AK105761	ProteinID:BAD31791.1
ProteinID:BAF20903.1	ProteinID:BAT00237.1	ProteinID:EEE66642.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	InterPro:IPR009014	EnsemblPlantsGene:Os07g0170100	EnsemblPlants:Os07t0170100-01	PFAM:PF02779	PFAM:PF02780
PANTHER:PTHR42980	PANTHER:PTHR42980:SF1	UniProt:Q69LD2	SMART:SM00861	SUPFAM:SSF52518	SUPFAM:SSF52922
InterPro:THDP-binding	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_C	UniParc:UPI00001BF735	RefSeq:XP_015646791.1
SEG:seg	:	:	:	:	:

Description

Similar to Branched chain alpha-keto acid dehydrogenase E1 beta subunit. (Os07t0170100-01);Similar to Branched chain alpha-keto acid dehydrogenase E1 beta subunit. (Os07t0170100-02)

Coordinates

chr7:-:3718709..3722651

Molecular Weight (calculated)

39728.5 Da

IEP (calculated)

5.728

GRAVY (calculated)

0.043

Length

370 amino acids

Sequence
(BLAST)

001: MAAKSLREIR RAAAAGIGSR RCFSGDAAAA AAAAAGVAEG KVGGGAGKEV NLFTAINQAL HIALDTDPRS YVFGEDVGFG GVFRCTTGLA DRFGRNRVFN
101: TPLCEQGIAG FAVGLAAMGN RAIAEIQFAD YIFPAFDQIV NEAAKFRYRS GNEFNCGGLT IRSPYGAVGH GGHYHSQSPE AFFCHVPGLK VIIPRSPREA
201: KGLLLASIRD PNPVVFFEPK WLYRLAVEEV PEEDYMLPLS EAEVIRKGSD ITLIGWGAQL AVLEEACEDA AKDGISCELI DLRTLIPWDK ETVEASVSKT
301: GKLLVSHEAP ITGGFGAEIA ASITERCFQR LEAPVARVCG LDTPFPLVYE TFYMPTKNKV LDAIKATVNY

Best Arabidopsis Sequence Match ( AT1G55510.1 )
(BLAST)

001: MAALLGRSCR KLSFPSLSHG ARRVSTETGK PLNLYSAINQ ALHIALDTDP RSYVFGEDVG FGGVFRCTTG LAERFGKNRV FNTPLCEQGI VGFGIGLAAM
101: GNRAIVEIQF ADYIYPAFDQ IVNEAAKFRY RSGNQFNCGG LTIRAPYGAV GHGGHYHSQS PEAFFCHVPG IKVVIPRSPR EAKGLLLSCI RDPNPVVFFE
201: PKWLYRQAVE EVPEHDYMIP LSEAEVIREG NDITLVGWGA QLTVMEQACL DAEKEGISCE LIDLKTLLPW DKETVEASVK KTGRLLISHE APVTGGFGAE
301: ISATILERCF LKLEAPVSRV CGLDTPFPLV FEPFYMPTKN KILDAIKSTV NY

Arabidopsis Description

BCDH BETA12-oxoisovalerate dehydrogenase subunit beta 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SAV3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.