Factsheet for Bra030856.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G017000.1	Barley	cytosol, mitochondrion	28.23	84.92
AT1G55510.1	Thale cress	mitochondrion	75.73	81.53
CDY02436	Canola	mitochondrion	78.36	75.77
KRH75712	Soybean	mitochondrion	67.81	72.19
VIT_06s0004g00190.t01	Wine grape	mitochondrion	68.07	72.07
Solyc01g028900.2.1	Tomato	plastid	67.28	71.23
TraesCS6B01G050600.1	Wheat	mitochondrion	52.51	71.07
KRH65916	Soybean	mitochondrion	67.02	70.95
HORVU5Hr1G114960.1	Barley	cytosol	37.2	68.78
Zm00001d007892_P001	Maize	mitochondrion	65.7	68.59
HORVU6Hr1G006560.2	Barley	mitochondrion	65.7	66.94
Os07t0170100-01	Rice	mitochondrion	65.17	66.76
TraesCS6D01G041600.1	Wheat	mitochondrion	65.44	66.49
EER98039	Sorghum	mitochondrion	64.38	66.12
TraesCS6A01G036000.1	Wheat	mitochondrion	64.12	65.68
GSMUA_Achr8P20340_001	Banana	mitochondrion	64.91	65.6
HORVU3Hr1G031230.1	Barley	mitochondrion, peroxisome, plastid	23.22	56.05
HORVU6Hr1G037690.1	Barley	plastid	24.01	54.17
HORVU1Hr1G025150.1	Barley	mitochondrion, nucleus, peroxisome	20.58	49.68
Bra032361.1-P	Field mustard	cytosol, mitochondrion, peroxisome	27.44	33.88
Bra026451.1-P	Field mustard	mitochondrion	28.23	31.01
Bra022529.1-P	Field mustard	mitochondrion	29.55	30.6
Bra022757.1-P	Field mustard	mitochondrion	29.29	30.25
Bra010796.1-P	Field mustard	plastid	29.29	27.54
Bra035715.1-P	Field mustard	mitochondrion	29.55	24.72

Protein Annotations

Gene3D:3.40.50.920	Gene3D:3.40.50.970	MapMan:35.1	EnsemblPlantsGene:Bra030856	EnsemblPlants:Bra030856.1	EnsemblPlants:Bra030856.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	InterPro:IPR009014	UniProt:M4EPY5
PFAM:PF02779	PFAM:PF02780	PANTHER:PTHR42980	PANTHER:PTHR42980:SF1	SMART:SM00861	SUPFAM:SSF52518
SUPFAM:SSF52922	InterPro:THDP-binding	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_C	UniParc:UPI0002547067
SEG:seg	:	:	:	:	:

Description

AT1G55510 (E=2e-075) BCDH BETA1 | BCDH BETA1 (BRANCHED-CHAIN ALPHA-KETO ACID DECARBOXYLASE E1 BETA SUBUNIT); 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)/ catalytic

Coordinates

chrA08:-:337331..339100

Molecular Weight (calculated)

41993.6 Da

IEP (calculated)

6.978

GRAVY (calculated)

-0.012

Length

379 amino acids

Sequence
(BLAST)

001: MASLLGRFCR KLVVPGSAHG SRMVSTTACD SEAVKSLNLH SAINQALHIA LETDPRSYVF GEDVGFGGVF RCTTGLAERF GKNRVFNTPL CEQGIVGFGI
101: GLAAMGNRAV VEIQFADYIY PAFDQVKRVF PTLEFDFSTA EFLIRGFNSQ IVNEAAKFRY RSGNQFNCGG LTIRAPYGAV GHGGHYHSQS PEAFFCHVPG
201: IKVVIPRSPR EAKGLLLSSI RDPNPVVFFE PKWLYRPAVE EVPEHDYMIP LSQAEVIREG NDITLVGWGA QLTVMEQACL DAEKVLDFIF QLKDNWFKVS
301: NMGLELIMQE GISCELIDLK TLLPWDKETV EASVKKTGRL LISHEAPVTG GFGAEISATI LERCFLKVKS LRFNSSRRD

Best Arabidopsis Sequence Match ( AT1G55510.1 )
(BLAST)

001: MAALLGRSCR KLSFPSLSHG ARRVSTETGK PLNLYSAINQ ALHIALDTDP RSYVFGEDVG FGGVFRCTTG LAERFGKNRV FNTPLCEQGI VGFGIGLAAM
101: GNRAIVEIQF ADYIYPAFDQ IVNEAAKFRY RSGNQFNCGG LTIRAPYGAV GHGGHYHSQS PEAFFCHVPG IKVVIPRSPR EAKGLLLSCI RDPNPVVFFE
201: PKWLYRQAVE EVPEHDYMIP LSEAEVIREG NDITLVGWGA QLTVMEQACL DAEKEGISCE LIDLKTLLPW DKETVEASVK KTGRLLISHE APVTGGFGAE
301: ISATILERCF LKLEAPVSRV CGLDTPFPLV FEPFYMPTKN KILDAIKSTV NY

Arabidopsis Description

BCDH BETA12-oxoisovalerate dehydrogenase subunit beta 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SAV3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.