Factsheet for Bra022529.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra017890.1-P
Bra035416.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G50850.1	Bra017890.1-P	AT1G59900.1	21798944
AT5G50850.1	Bra035416.1-P	AT1G59900.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16348	Canola	mitochondrion	98.63	98.63
CDX91560	Canola	mitochondrion	98.36	98.36
Bra026451.1-P	Field mustard	mitochondrion	90.44	95.94
Bra022757.1-P	Field mustard	mitochondrion	95.63	95.37
AT5G50850.1	Thale cress	mitochondrion	94.26	95.04
TraesCS7D01G263900.2	Wheat	mitochondrion	81.97	81.97
TraesCS7A01G263300.1	Wheat	plastid	82.51	81.84
Solyc06g072580.2.1	Tomato	nucleus	81.97	81.74
KRH73802	Soybean	mitochondrion	80.33	81.67
TraesCS7B01G161100.1	Wheat	mitochondrion	82.24	81.57
HORVU7Hr1G055090.3	Barley	mitochondrion	82.24	81.35
KRH16935	Soybean	mitochondrion	79.78	81.11
KRH14338	Soybean	mitochondrion	79.51	80.83
Os08t0536000-01	Rice	mitochondrion	82.51	80.75
VIT_01s0146g00310.t01	Wine grape	mitochondrion	80.87	80.65
TraesCS5A01G291500.1	Wheat	golgi	81.97	79.79
TraesCS5B01G290600.1	Wheat	mitochondrion	81.97	79.79
TraesCS5D01G299000.1	Wheat	mitochondrion	81.97	79.79
Solyc03g097680.2.1	Tomato	plastid	80.33	79.67
Os09t0509200-01	Rice	mitochondrion	81.69	79.52
EER97019	Sorghum	mitochondrion	81.42	79.47
Zm00001d006107_P001	Maize	mitochondrion	81.15	79.41
VIT_17s0000g00690.t01	Wine grape	mitochondrion	77.32	79.05
KXG25507	Sorghum	mitochondrion	80.6	78.88
PGSC0003DMT400011072	Potato	mitochondrion	79.51	78.86
PGSC0003DMT400069263	Potato	mitochondrion	79.78	76.04
Zm00001d031659_P001	Maize	mitochondrion	80.87	74.56
GSMUA_Achr8P09180_001	Banana	extracellular, mitochondrion, peroxisome	43.99	74.19
Bra035715.1-P	Field mustard	mitochondrion	89.07	71.96
GSMUA_Achr5P25000_001	Banana	mitochondrion, plastid	80.05	70.77
Zm00001d021070_P002	Maize	mitochondrion	78.69	70.07
HORVU5Hr1G077200.2	Barley	mitochondrion, plastid	81.15	68.91
Bra032361.1-P	Field mustard	cytosol, mitochondrion, peroxisome	34.97	41.69
Bra010796.1-P	Field mustard	plastid	36.89	33.5
Bra030856.1-P	Field mustard	mitochondrion	30.6	29.55

Protein Annotations

KEGG:00010+1.2.4.1	KEGG:00020+1.2.4.1	KEGG:00620+1.2.4.1	MapMan:2.2.1.1.2	Gene3D:3.40.50.920	Gene3D:3.40.50.970
EnsemblPlantsGene:Bra022529	EnsemblPlants:Bra022529.1	EnsemblPlants:Bra022529.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004739
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759
GO:GO:0005975	GO:GO:0006086	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114
InterPro:IPR009014	UniProt:M4E181	InterPro:PDHB	PFAM:PF02779	PFAM:PF02780	PANTHER:PTHR11624
PANTHER:PTHR11624:SF94	SMART:SM00861	SUPFAM:SSF52518	SUPFAM:SSF52922	InterPro:THDP-binding	InterPro:Transketo_C/PFOR_II
InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_C	UniParc:UPI000254557F	SEG:seg	:	:

Description

AT5G50850 (E=2e-186) MAB1 | MAB1 (MACCI-BOU); catalytic/ pyruvate dehydrogenase (acetyl-transferring)

Coordinates

chrA02:-:9219261..9221953

Molecular Weight (calculated)

39295.1 Da

IEP (calculated)

5.894

GRAVY (calculated)

-0.028

Length

366 amino acids

Sequence
(BLAST)

001: MWGILGRRAV DGGLSASSLR RMRSGLVSAR SYAAGSKEMT VRDALNSAID EEMSADPKVF VMGEEVGQYQ GAYKITKGLL EKYGPERVYD TPITEAGFTG
101: IGVGAAYAGL KPVVEFMTFN FSMQAIDHII NSAAKSNYMS AGQINVPIVC RGPKGAAAGV GAQHSQCYAA WYASVPGLKV LAPYSAEDAR GLLKAAIRDP
201: DPVVFLENEL LYGESFPISE EALDSSFCLP IGKAKIEREG KDVTITTFSK MVGFALKAAE KLAEEGISAE VINLRSIRPL DRATINASVR KTSRLVTVEE
301: GFPQHGVCAE ICASVVEESF SYLDAPAERI AGADVPMPYS ANLERLALPQ VEDIVRAAKR ACFRSK

Best Arabidopsis Sequence Match ( AT5G50850.1 )
(BLAST)

001: MLGILRQRAI DGASTLRRTR FALVSARSYA AGAKEMTVRD ALNSAIDEEM SADPKVFVMG EEVGQYQGAY KITKGLLEKY GPERVYDTPI TEAGFTGIGV
101: GAAYAGLKPV VEFMTFNFSM QAIDHIINSA AKSNYMSAGQ INVPIVFRGP NGAAAGVGAQ HSQCYAAWYA SVPGLKVLAP YSAEDARGLL KAAIRDPDPV
201: VFLENELLYG ESFPISEEAL DSSFCLPIGK AKIEREGKDV TIVTFSKMVG FALKAAEKLA EEGISAEVIN LRSIRPLDRA TINASVRKTS RLVTVEEGFP
301: QHGVCAEICA SVVEESFSYL DAPVERIAGA DVPMPYAANL ERLALPQIED IVRASKRACY RSK

Arabidopsis Description

PDH2Pyruvate dehydrogenase E1 component subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A178UM82]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.