Factsheet for Bra026451.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra017890.1-P
Bra035416.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G50850.1	Bra017890.1-P	AT1G59900.1	21798944
AT5G50850.1	Bra035416.1-P	AT1G59900.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022757.1-P	Field mustard	mitochondrion	99.13	93.19
CDX84881	Canola	mitochondrion	99.13	93.19
AT5G50850.1	Thale cress	mitochondrion	95.94	91.18
Bra022529.1-P	Field mustard	mitochondrion	95.94	90.44
TraesCS7D01G263900.2	Wheat	mitochondrion	83.19	78.42
TraesCS7A01G263300.1	Wheat	plastid	83.77	78.32
TraesCS7B01G161100.1	Wheat	mitochondrion	83.48	78.05
HORVU7Hr1G055090.3	Barley	mitochondrion	83.48	77.84
Solyc06g072580.2.1	Tomato	nucleus	82.32	77.38
Os08t0536000-01	Rice	mitochondrion	83.48	77.01
KRH73802	Soybean	mitochondrion	80.29	76.94
KRH16935	Soybean	mitochondrion	80.29	76.94
VIT_17s0000g00690.t01	Wine grape	mitochondrion	79.71	76.82
KRH14338	Soybean	mitochondrion	79.71	76.39
Os09t0509200-01	Rice	mitochondrion	82.9	76.06
VIT_01s0146g00310.t01	Wine grape	mitochondrion	80.87	76.02
Solyc03g097680.2.1	Tomato	plastid	81.16	75.88
TraesCS5A01G291500.1	Wheat	golgi	82.32	75.53
TraesCS5B01G290600.1	Wheat	mitochondrion	82.32	75.53
TraesCS5D01G299000.1	Wheat	mitochondrion	82.32	75.53
EER97019	Sorghum	mitochondrion	82.03	75.47
Zm00001d006107_P001	Maize	mitochondrion	81.74	75.4
KXG25507	Sorghum	mitochondrion	81.45	75.13
PGSC0003DMT400011072	Potato	mitochondrion	80.0	74.8
PGSC0003DMT400069263	Potato	mitochondrion	80.0	71.88
Zm00001d031659_P001	Maize	mitochondrion	81.74	71.03
Bra035715.1-P	Field mustard	mitochondrion	89.86	68.43
GSMUA_Achr5P25000_001	Banana	mitochondrion, plastid	80.87	67.39
GSMUA_Achr8P09180_001	Banana	extracellular, mitochondrion, peroxisome	42.03	66.82
Zm00001d021070_P002	Maize	mitochondrion	79.42	66.67
HORVU5Hr1G077200.2	Barley	mitochondrion, plastid	81.45	65.2
Bra032361.1-P	Field mustard	cytosol, mitochondrion, peroxisome	35.65	40.07
Bra010796.1-P	Field mustard	plastid	37.97	32.51
Bra030856.1-P	Field mustard	mitochondrion	31.01	28.23

Protein Annotations

KEGG:00010+1.2.4.1	KEGG:00020+1.2.4.1	KEGG:00620+1.2.4.1	MapMan:2.2.1.1.2	Gene3D:3.40.50.920	Gene3D:3.40.50.970
EnsemblPlantsGene:Bra026451	EnsemblPlants:Bra026451.1	EnsemblPlants:Bra026451.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004739
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759
GO:GO:0005975	GO:GO:0006086	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114
InterPro:IPR009014	UniProt:M4ECE2	InterPro:PDHB	PFAM:PF02779	PFAM:PF02780	PANTHER:PTHR11624
PANTHER:PTHR11624:SF94	SMART:SM00861	SUPFAM:SSF52518	SUPFAM:SSF52922	InterPro:THDP-binding	InterPro:Transketo_C/PFOR_II
InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_C	UniParc:UPI000254717F	SEG:seg	:	:

Description

AT5G50850 (E=2e-121) MAB1 | MAB1 (MACCI-BOU); catalytic/ pyruvate dehydrogenase (acetyl-transferring)

Coordinates

chrA01:-:9244916..9247547

Molecular Weight (calculated)

37081.2 Da

IEP (calculated)

5.295

GRAVY (calculated)

-0.029

Length

345 amino acids

Sequence
(BLAST)

001: MWGILRRSAV DGGGFSASSL RRTRFSLVSA RSYAAGSKEM TVRDALNSAI DEEMSADPKV FVMGEEVGQY QGAYKITKGL LEKYGPERVY DTPITEAGFT
101: GIGVGAAYAG LKPVVEFMTF NFSMQAIDHI INSAAKSNYM SAGQINVPIV FRGPNGAAAG VGAQHSQCYA AWYASVPGLK VLAPYSAEDA RGLLKAAIRD
201: PDPVVFLENE LLYGESFPIS EEALDSSFCL PIGKAKAAEK LAEEGISAEV INLRSIRPLD RATINASVRK TSRLVTVEEG FPQHGVCAEI CASVVEESFS
301: YLDAPVERIA GADVPMPYAA NLERLALPQV EDIVRAAKRA CYRSK

Best Arabidopsis Sequence Match ( AT5G50850.1 )
(BLAST)

001: MLGILRQRAI DGASTLRRTR FALVSARSYA AGAKEMTVRD ALNSAIDEEM SADPKVFVMG EEVGQYQGAY KITKGLLEKY GPERVYDTPI TEAGFTGIGV
101: GAAYAGLKPV VEFMTFNFSM QAIDHIINSA AKSNYMSAGQ INVPIVFRGP NGAAAGVGAQ HSQCYAAWYA SVPGLKVLAP YSAEDARGLL KAAIRDPDPV
201: VFLENELLYG ESFPISEEAL DSSFCLPIGK AKIEREGKDV TIVTFSKMVG FALKAAEKLA EEGISAEVIN LRSIRPLDRA TINASVRKTS RLVTVEEGFP
301: QHGVCAEICA SVVEESFSYL DAPVERIAGA DVPMPYAANL ERLALPQIED IVRASKRACY RSK

Arabidopsis Description

PDH2Pyruvate dehydrogenase E1 component subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A178UM82]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.