Factsheet for Bra017890.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31596	Canola	mitochondrion	71.11	95.52
Zm00001d014833_P001	Maize	cytosol, golgi	44.44	44.44
Zm00001d014514_P001	Maize	cytosol, mitochondrion, plastid	47.78	31.39
GSMUA_Achr7P05520_001	Banana	cytosol, mitochondrion	65.56	20.27
KRG99219	Soybean	mitochondrion	70.0	18.31
GSMUA_Achr1P18330_001	Banana	cytosol, mitochondrion	65.56	18.21
Bra035416.1-P	Field mustard	mitochondrion	74.44	17.22
Zm00001d044748_P002	Maize	mitochondrion	71.11	16.33
AT1G59900.1	Thale cress	mitochondrion	70.0	16.2
TraesCS6A01G311800.1	Wheat	golgi	66.67	16.17
KRH74712	Soybean	mitochondrion	65.56	16.12
Bra016238.1-P	Field mustard	mitochondrion	71.11	16.0
KRH45768	Soybean	mitochondrion	70.0	15.99
TraesCS6B01G342000.1	Wheat	mitochondrion	68.89	15.98
TraesCS6D01G291100.1	Wheat	mitochondrion	68.89	15.98
EER88157	Sorghum	mitochondrion	70.0	15.95
VIT_01s0026g00990.t01	Wine grape	mitochondrion, plastid	70.0	15.83
Bra024643.1-P	Field mustard	mitochondrion	67.78	15.76
Bra012418.1-P	Field mustard	mitochondrion	68.89	15.66
Solyc05g006520.2.1	Tomato	plastid	67.78	15.6
PGSC0003DMT400058223	Potato	mitochondrion	67.78	15.6
VIT_09s0018g01940.t01	Wine grape	mitochondrion, plastid	68.89	15.58
KRH69435	Soybean	mitochondrion	67.78	15.4
Os02t0739600-01	Rice	mitochondrion	66.67	15.38
Zm00001d017985_P001	Maize	mitochondrion	66.67	15.38
EES05555	Sorghum	mitochondrion	66.67	15.38
HORVU6Hr1G076810.1	Barley	plastid	68.89	15.35
Solyc04g005080.2.1	Tomato	mitochondrion, unclear	66.67	15.35
Os06t0246500-01	Rice	plastid	67.78	15.33
PGSC0003DMT400004851	Potato	mitochondrion	65.56	15.21
Zm00001d052289_P001	Maize	mitochondrion	65.56	15.13
TraesCS7A01G238900.1	Wheat	mitochondrion	65.56	15.09
TraesCS7D01G199900.1	Wheat	golgi	65.56	14.97
TraesCS7B01G103800.2	Wheat	mitochondrion	51.11	12.71
HORVU7Hr1G040460.4	Barley	mitochondrion	65.56	11.73
Bra032619.1-P	Field mustard	plastid	26.67	5.65
Bra033286.1-P	Field mustard	plastid	26.67	5.63
Bra016423.1-P	Field mustard	mitochondrion	27.78	5.31
Bra017912.1-P	Field mustard	mitochondrion	26.67	5.08
Bra006017.1-P	Field mustard	plastid	25.56	4.91
KRG95283	Soybean	cytosol, mitochondrion, plastid	2.22	1.22
Os02t0739700-01	Rice	plastid	2.22	0.45
Solyc04g025710.1.1	Tomato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Bra017890.1	EnsemblPlants:Bra017890.1-P	EnsemblPlantsGene:Bra017890	Gene3D:3.40.50.970	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016624	GO:GO:0055114	InterPro:DH_E1	InterPro:THDP-binding
PANTHER:PTHR11516	PANTHER:PTHR11516:SF38	PFAM:PF00676	SUPFAM:SSF52518	UniParc:UPI0002540DDD	UniProt:M4DN03
MapMan:35.1	:	:	:	:	:

Description

AT1G59900 (E=3e-030) AT-E1 ALPHA | AT-E1 ALPHA; oxidoreductase, acting on the aldehyde or oxo group of donors, disulfide as acceptor / pyruvate dehydrogenase (acetyl-transferring)

Coordinates

chrA03:-:31356980..31361049

Molecular Weight (calculated)

9891.0 Da

IEP (calculated)

7.600

GRAVY (calculated)

-0.200

Length

90 amino acids

Sequence
(BLAST)

1: MVAPSLVMRN GMETADWRAA KSPSYYKRGD YVPGLKVDGM DAFAVKQACK LAKEHALKNG PIILEMDTYS GHSMSDPVGA HTVQEMIYLV

Best Arabidopsis Sequence Match ( AT1G59900.2 )
(BLAST)

001: MALSRLSSRS NIITRPFSAA FSRLISTDTT PITIETSLPF TAHLCDPPSR SVESSSQELL DFFRTMALMR RMEIAADSLY KAKLIRGFCH LYDGQEAVAI
101: GMEAAITKKD AIITAYRDHC IFLGRGGSLH EVFSELMGRQ AGCSKGKGGS MHFYKKESSF YGGHGIVGAQ VPLGCGIAFA QKYNKEEAVT FALYGDGAAN
201: QGQLFEALNI SALWDLPAIL VCENNHYGMG TAEWRAAKSP SYYKRGDYVP GLKVDGMDAF AVKQACKFAK QHALEKGPII LEMDTYRYHG HSMSDPGSTY
301: RTRDEISGVR QERDPIERIK KLVLSHDLAT EKELKDMEKE IRKEVDDAIA KAKDCPMPEP SELFTNVYVK GFGTEVLH

Arabidopsis Description

E1 ALPHAPyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52901]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.