Factsheet for HORVU7Hr1G040460.4

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G199900.1	Wheat	golgi	77.14	98.48
TraesCS7A01G238900.1	Wheat	mitochondrion	75.94	97.7
TraesCS7B01G103800.2	Wheat	mitochondrion	70.18	97.51
EER88157	Sorghum	mitochondrion	69.78	88.86
Zm00001d044748_P002	Maize	mitochondrion	68.19	87.5
Os06t0246500-01	Rice	plastid	69.18	87.44
GSMUA_Achr1P18330_001	Banana	cytosol, mitochondrion	53.88	83.64
GSMUA_Achr7P05520_001	Banana	cytosol, mitochondrion	47.12	81.44
CDY31596	Canola	mitochondrion	10.74	80.6
HORVU6Hr1G076810.1	Barley	plastid	64.41	80.2
KRG99219	Soybean	mitochondrion	52.68	77.03
CDY24500	Canola	mitochondrion	59.44	76.86
Bra035416.1-P	Field mustard	mitochondrion	59.44	76.86
CDY16236	Canola	mitochondrion	59.05	76.74
CDY33613	Canola	mitochondrion	59.24	76.61
CDY70124	Canola	cytosol	22.07	76.55
CDY38784	Canola	mitochondrion	59.44	76.28
Bra024643.1-P	Field mustard	mitochondrion	58.65	76.23
KRH45768	Soybean	mitochondrion	59.44	75.89
AT1G59900.1	Thale cress	mitochondrion	58.65	75.84
AT1G24180.1	Thale cress	mitochondrion	59.24	75.83
CDY11622	Canola	mitochondrion	59.05	75.77
KRH69435	Soybean	mitochondrion	59.44	75.51
CDY40292	Canola	mitochondrion	58.85	74.94
Solyc05g006520.2.1	Tomato	plastid	58.25	74.94
PGSC0003DMT400058223	Potato	mitochondrion	58.25	74.94
Bra012418.1-P	Field mustard	mitochondrion	58.85	74.75
CDY28458	Canola	mitochondrion	58.65	74.68
PGSC0003DMT400004851	Potato	mitochondrion	57.26	74.23
KRH74712	Soybean	mitochondrion	53.68	73.77
Bra016238.1-P	Field mustard	mitochondrion	58.65	73.75
Solyc04g005080.2.1	Tomato	mitochondrion, unclear	57.26	73.66
VIT_09s0018g01940.t01	Wine grape	mitochondrion, plastid	58.25	73.62
VIT_01s0026g00990.t01	Wine grape	mitochondrion, plastid	57.46	72.61
Bra017890.1-P	Field mustard	cytosol	11.73	65.56
CDY55062	Canola	cytosol	24.06	64.36
CDY14675	Canola	cytosol	54.47	62.27
CDY55064	Canola	plasma membrane	40.56	62.2
KRG95283	Soybean	cytosol, mitochondrion, plastid	20.08	61.59
HORVU2Hr1G086290.1	Barley	extracellular, vacuole	8.95	43.69
HORVU2Hr1G001600.1	Barley	plastid	28.23	31.07
HORVU5Hr1G034820.3	Barley	mitochondrion	20.08	21.54

Protein Annotations

KEGG:00010+1.2.4.1	KEGG:00020+1.2.4.1	KEGG:00620+1.2.4.1	MapMan:2.2.1.1.1	Gene3D:3.40.50.970	UniProt:A0A287W6W0
ncoils:Coil	InterPro:DH_E1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004739	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006086	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016491	GO:GO:0016624	GO:GO:0043231	GO:GO:0055114	EnsemblPlantsGene:HORVU7Hr1G040460
EnsemblPlants:HORVU7Hr1G040460.4	PFAM:PF00676	PANTHER:PTHR11516	PANTHER:PTHR11516:SF38	InterPro:Pyrv_DH_E1_asu_subgrp-y	SUPFAM:SSF52518
InterPro:THDP-binding	TIGRFAMs:TIGR03182	UniParc:UPI000B46BDF4	SEG:seg	:	:

Description

Pyruvate dehydrogenase E1 component subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A287W6W0]

Coordinates

chrchr7H:-:109751225..109754866

Molecular Weight (calculated)

54925.0 Da

IEP (calculated)

9.187

GRAVY (calculated)

-0.376

Length

503 amino acids

Sequence
(BLAST)

001: TAARRRCGAV GADLDRRSLA HGGNAQPCTC LAPFPPSPRR STGHAARPAV PRHRAPANPR HAPPPRPQLP LPNHLGDAPL RPRPLQPARC PCVPSQNPAD
101: SLNPGSASNH AMAAAILRRL SPAAAQRAPP RLLPLVRGVS DSTEPLTVET SIPFTSHIVD PPSREVTTTP RELAAAFRDM ALMRRAEIAA DSLYKAKLIR
201: GFCHLYDGQE AVAVGMEAAI TRRDAIITAY RDHCLYLARG GDLVAAFAEL MGRVDGCSRG KGGSMHFYKK DANFYGGHGI VGAQVPLGCG LAFAQRYRKE
301: GTVTFDLYGD GAANQGQLFE ALNMAALWKL PVILVCENNH YGMGTAEWKA SKSPAYYKRG DYVPGLKVDG MDFLAVKQAC KFAKEHVLEN GPIILEMDTY
401: RYHGHSMSDP GSTYRTRDEI AGIRQERDPI ERVRKLLLTH DLATAQELKD MEKEIRKEVD TAIAKAKESP MPDTSELFKN VYVNDCGLES FGVDRKVVRT
501: VLP

Best Arabidopsis Sequence Match ( AT1G24180.1 )
(BLAST)

001: MALSRLSSRS NTFLKPAITA LPSSIRRHVS TDSSPITIET AVPFTSHLCE SPSRSVETSS EEILAFFRDM ARMRRMEIAA DSLYKAKLIR GFCHLYDGQE
101: ALAVGMEAAI TKKDAIITSY RDHCTFIGRG GKLVDAFSEL MGRKTGCSHG KGGSMHFYKK DASFYGGHGI VGAQIPLGCG LAFAQKYNKD EAVTFALYGD
201: GAANQGQLFE ALNISALWDL PAILVCENNH YGMGTATWRS AKSPAYFKRG DYVPGLKVDG MDALAVKQAC KFAKEHALKN GPIILEMDTY RYHGHSMSDP
301: GSTYRTRDEI SGVRQVRDPI ERVRKLLLTH DIATEKELKD MEKEIRKEVD DAVAQAKESP IPDASELFTN MYVKDCGVES FGADRKELKV TLP

Arabidopsis Description

IAR4Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8H1Y0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.