Factsheet for PGSC0003DMT400004851

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g005080.2.1	Tomato	mitochondrion, unclear	98.45	97.7
PGSC0003DMT400058223	Potato	mitochondrion	87.37	86.7
GSMUA_Achr7P05520_001	Banana	cytosol, mitochondrion	64.43	85.91
GSMUA_Achr1P18330_001	Banana	cytosol, mitochondrion	69.85	83.64
CDY31596	Canola	mitochondrion	13.92	80.6
TraesCS6A01G311800.1	Wheat	golgi	76.55	80.05
KRH69435	Soybean	mitochondrion	80.93	79.29
KRH74712	Soybean	mitochondrion	73.71	78.14
AT1G59900.1	Thale cress	mitochondrion	78.09	77.89
CDY33613	Canola	mitochondrion	78.09	77.89
CDY24500	Canola	mitochondrion	78.09	77.89
Bra035416.1-P	Field mustard	mitochondrion	78.09	77.89
TraesCS6B01G342000.1	Wheat	mitochondrion	77.32	77.32
TraesCS6D01G291100.1	Wheat	mitochondrion	77.32	77.32
KRH45768	Soybean	mitochondrion	78.35	77.16
Os02t0739600-01	Rice	mitochondrion	77.32	76.92
KRG99219	Soybean	mitochondrion	68.04	76.74
VIT_01s0026g00990.t01	Wine grape	mitochondrion, plastid	78.61	76.63
EES05555	Sorghum	mitochondrion	76.55	76.15
Zm00001d017985_P001	Maize	mitochondrion	76.29	75.9
CDY70124	Canola	cytosol	28.35	75.86
CDY38784	Canola	mitochondrion	76.55	75.77
CDY11622	Canola	mitochondrion	76.29	75.51
VIT_09s0018g01940.t01	Wine grape	mitochondrion, plastid	77.06	75.13
Zm00001d052289_P001	Maize	mitochondrion	75.0	74.62
HORVU6Hr1G076810.1	Barley	plastid	77.32	74.26
AT1G24180.1	Thale cress	mitochondrion	75.0	74.05
CDY16236	Canola	mitochondrion	73.2	73.39
Bra016238.1-P	Field mustard	mitochondrion	75.52	73.25
TraesCS7A01G238900.1	Wheat	mitochondrion	73.71	73.15
Bra024643.1-P	Field mustard	mitochondrion	72.94	73.13
TraesCS7D01G199900.1	Wheat	golgi	74.23	73.1
CDY28458	Canola	mitochondrion	73.71	72.41
Bra012418.1-P	Field mustard	mitochondrion	73.71	72.22
EER88157	Sorghum	mitochondrion	73.45	72.15
CDY40292	Canola	mitochondrion	73.45	72.15
TraesCS7B01G103800.2	Wheat	mitochondrion	67.27	72.1
Zm00001d044748_P002	Maize	mitochondrion	72.42	71.68
Os06t0246500-01	Rice	plastid	72.42	70.6
Bra017890.1-P	Field mustard	cytosol	15.21	65.56
KRG95283	Soybean	cytosol, mitochondrion, plastid	27.58	65.24
CDY55062	Canola	cytosol	31.19	64.36
CDY55064	Canola	plasma membrane	52.32	61.89
CDY14675	Canola	cytosol	69.59	61.36
HORVU7Hr1G040460.4	Barley	mitochondrion	74.23	57.26
PGSC0003DMT400007571	Potato	plastid	35.31	31.14
PGSC0003DMT400035288	Potato	plastid	34.28	30.43
PGSC0003DMT400012840	Potato	cytosol, mitochondrion, plasma membrane	18.04	25.64
PGSC0003DMT400060275	Potato	mitochondrion	28.09	23.34
PGSC0003DMT400063962	Potato	mitochondrion, plastid	25.52	21.02
PGSC0003DMT400033905	Potato	mitochondrion	24.48	20.83
Os02t0739700-01	Rice	plastid	1.8	1.59

Protein Annotations

KEGG:00010+1.2.4.1	KEGG:00020+1.2.4.1	KEGG:00620+1.2.4.1	EntrezGene:102594416	MapMan:2.2.1.1.1	Gene3D:3.40.50.970
InterPro:DH_E1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004739	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006086	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016491	GO:GO:0016624	GO:GO:0043231	GO:GO:0055114	UniProt:M0ZP30	PFAM:PF00676
EnsemblPlantsGene:PGSC0003DMG400001927	PGSC:PGSC0003DMG400001927	EnsemblPlants:PGSC0003DMT400004851	PANTHER:PTHR11516	PANTHER:PTHR11516:SF38	InterPro:Pyrv_DH_E1_asu_subgrp-y
SUPFAM:SSF52518	InterPro:THDP-binding	TIGRFAMs:TIGR03182	UniParc:UPI0002961C6E	RefSeq:XP_006363541.1	:

Description

Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial [Source:PGSC_GENE;Acc:PGSC0003DMG400001927]

Coordinates

chr00:-:12393985..12400240

Molecular Weight (calculated)

42852.4 Da

IEP (calculated)

7.355

GRAVY (calculated)

-0.317

Length

388 amino acids

Sequence
(BLAST)

001: MALSTIRTVN HLLKPFTAAT RRLSSDSNAT INVEISKPYT AHNIDPPSSI VETTPNELMT FFSDMAEMRR MEIAADSLYK AKLIRGFCHL YDGQEAVAIG
101: MEAAITKKDC IITAYRDHCI FLARGGGLVE SFAELMGRKD GCSKGKGGSM HFYKKDSGFY GGHGIVGAQV PLGIGISFAQ KYNKEDHVTF AMYGDGAANQ
201: GQLFEALNMA ALWDLPAILV CENNHYGMGT AEWRAAKSPA YYKRGDYVPG LKVDGMDALA VKQACKFAKD HVLTKGPIIL EMDTYRYHGH SMSDPGSTYR
301: TRDEISGVRG ERDPVERIRN LILDHNIATE QELKDIEKGK RKVVDEAIAK AKEIPMPDPS DLFTNVYVKG FGVEVFGADR KELRSTLP

Best Arabidopsis Sequence Match ( AT1G59900.1 )
(BLAST)

001: MALSRLSSRS NIITRPFSAA FSRLISTDTT PITIETSLPF TAHLCDPPSR SVESSSQELL DFFRTMALMR RMEIAADSLY KAKLIRGFCH LYDGQEAVAI
101: GMEAAITKKD AIITAYRDHC IFLGRGGSLH EVFSELMGRQ AGCSKGKGGS MHFYKKESSF YGGHGIVGAQ VPLGCGIAFA QKYNKEEAVT FALYGDGAAN
201: QGQLFEALNI SALWDLPAIL VCENNHYGMG TAEWRAAKSP SYYKRGDYVP GLKVDGMDAF AVKQACKFAK QHALEKGPII LEMDTYRYHG HSMSDPGSTY
301: RTRDEISGVR QERDPIERIK KLVLSHDLAT EKELKDMEKE IRKEVDDAIA KAKDCPMPEP SELFTNVYVK GFGTESFGPD RKEVKASLP

Arabidopsis Description

E1 ALPHAPyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52901]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.