Factsheet for Bra012418.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 9
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40292	Canola	mitochondrion	99.49	99.75
Bra024643.1-P	Field mustard	mitochondrion	93.18	95.35
AT1G24180.1	Thale cress	mitochondrion	90.91	91.6
Zm00001d014833_P001	Maize	cytosol, golgi	19.19	84.44
Bra016238.1-P	Field mustard	mitochondrion	83.59	82.75
Bra035416.1-P	Field mustard	mitochondrion	80.56	82.01
GSMUA_Achr1P18330_001	Banana	cytosol, mitochondrion	66.67	81.48
GSMUA_Achr7P05520_001	Banana	cytosol, mitochondrion	59.85	81.44
KRH69435	Soybean	mitochondrion	79.8	79.8
TraesCS6A01G311800.1	Wheat	golgi	74.75	79.78
KRG99219	Soybean	mitochondrion	68.94	79.36
Os02t0739600-01	Rice	mitochondrion	77.53	78.72
KRH45768	Soybean	mitochondrion	78.03	78.43
Zm00001d017985_P001	Maize	mitochondrion	76.77	77.95
TraesCS6D01G291100.1	Wheat	mitochondrion	76.01	77.58
TraesCS6B01G342000.1	Wheat	mitochondrion	76.01	77.58
EES05555	Sorghum	mitochondrion	76.26	77.44
KRH74712	Soybean	mitochondrion	71.21	77.05
Zm00001d052289_P001	Maize	mitochondrion	75.0	76.15
PGSC0003DMT400058223	Potato	mitochondrion	75.0	75.96
VIT_01s0026g00990.t01	Wine grape	mitochondrion, plastid	76.26	75.88
Solyc05g006520.2.1	Tomato	plastid	74.75	75.7
TraesCS7A01G238900.1	Wheat	mitochondrion	74.75	75.7
VIT_09s0018g01940.t01	Wine grape	mitochondrion, plastid	76.01	75.63
TraesCS7D01G199900.1	Wheat	golgi	75.0	75.38
HORVU6Hr1G076810.1	Barley	plastid	75.76	74.26
Solyc04g005080.2.1	Tomato	mitochondrion, unclear	72.98	73.91
TraesCS7B01G103800.2	Wheat	mitochondrion	67.42	73.76
PGSC0003DMT400004851	Potato	mitochondrion	72.22	73.71
Zm00001d044748_P002	Maize	mitochondrion	72.73	73.47
EER88157	Sorghum	mitochondrion	73.23	73.42
Os06t0246500-01	Rice	plastid	72.98	72.61
Zm00001d014514_P001	Maize	cytosol, mitochondrion, plastid	23.99	69.34
Bra017890.1-P	Field mustard	cytosol	15.66	68.89
KRG95283	Soybean	cytosol, mitochondrion, plastid	27.02	65.24
HORVU7Hr1G040460.4	Barley	mitochondrion	74.75	58.85
Bra032619.1-P	Field mustard	plastid	34.34	32.0
Bra033286.1-P	Field mustard	plastid	34.34	31.92
Bra006017.1-P	Field mustard	plastid	24.49	20.73
Bra016423.1-P	Field mustard	mitochondrion	24.49	20.59
Bra017912.1-P	Field mustard	mitochondrion	24.24	20.34
Solyc04g025710.1.1	Tomato	cytosol	4.55	16.67
Os02t0739700-01	Rice	plastid	2.78	2.49

Protein Annotations

KEGG:00010+1.2.4.1	KEGG:00020+1.2.4.1	KEGG:00620+1.2.4.1	MapMan:2.2.1.1.1	Gene3D:3.40.50.970	EnsemblPlantsGene:Bra012418
EnsemblPlants:Bra012418.1	EnsemblPlants:Bra012418.1-P	InterPro:DH_E1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004739
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006086	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016624	GO:GO:0043231	GO:GO:0055114
UniProt:M4D7F8	PFAM:PF00676	PANTHER:PTHR11516	PANTHER:PTHR11516:SF38	InterPro:Pyrv_DH_E1_asu_subgrp-y	SUPFAM:SSF52518
InterPro:THDP-binding	TIGRFAMs:TIGR03182	UniParc:UPI0002540B97	SEG:seg	:	:

Description

AT1G24180 (E=6e-204) IAR4 | IAR4; oxidoreductase, acting on the aldehyde or oxo group of donors, disulfide as acceptor / pyruvate dehydrogenase (acetyl-transferring)

Coordinates

chrA07:+:7789452..7791596

Molecular Weight (calculated)

43789.3 Da

IEP (calculated)

7.756

GRAVY (calculated)

-0.330

Length

396 amino acids

Sequence
(BLAST)

001: MALSRLSLRS NRFLQPSSTT AAALPSSLRR HVSTDTTPIT IETAVPFESH LCDAPSRSVE TSSSEILSFF RDMARMRRME IAADSLYKSK LIRGFCHLYD
101: GQEALAVGME AAITRKDAII TSYRDHCTFL GRGGELVDAF SELMGRKRGC SNGKGGSMHF YKKDACFYGG HGIVGAQIPL GCGLAFAQKY SKEEFVTFTL
201: YGDGAANQGQ LFEALNIAAL WDLPAILVCE NNHYGMGTAT WRSAKSPAYF KRGDYVPGLK VDGMDALAVK QACKFAKEHA LKNGPIVLEM DTYRYHGHSM
301: SDPGSTYRTR DEVSGVRQVR DPIERVRKLL LSHDIATEKE LKDMEKEVRK EVDDAVAQAK ESPVPEPSEL FTNMYVKDCG VESFGADRKE LKVTLA

Best Arabidopsis Sequence Match ( AT1G24180.1 )
(BLAST)

001: MALSRLSSRS NTFLKPAITA LPSSIRRHVS TDSSPITIET AVPFTSHLCE SPSRSVETSS EEILAFFRDM ARMRRMEIAA DSLYKAKLIR GFCHLYDGQE
101: ALAVGMEAAI TKKDAIITSY RDHCTFIGRG GKLVDAFSEL MGRKTGCSHG KGGSMHFYKK DASFYGGHGI VGAQIPLGCG LAFAQKYNKD EAVTFALYGD
201: GAANQGQLFE ALNISALWDL PAILVCENNH YGMGTATWRS AKSPAYFKRG DYVPGLKVDG MDALAVKQAC KFAKEHALKN GPIILEMDTY RYHGHSMSDP
301: GSTYRTRDEI SGVRQVRDPI ERVRKLLLTH DIATEKELKD MEKEIRKEVD DAVAQAKESP IPDASELFTN MYVKDCGVES FGADRKELKV TLP

Arabidopsis Description

IAR4Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8H1Y0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.