Factsheet for Bra017912.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50237	Canola	mitochondrion	100.0	100.0
CDY65512	Canola	mitochondrion	98.73	98.73
Bra016423.1-P	Field mustard	mitochondrion	87.71	87.9
AT1G21400.5	Thale cress	plastid	89.41	80.53
Solyc06g059850.1.1	Tomato	cytosol	55.51	68.95
VIT_18s0001g14980.t01	Wine grape	plastid	63.98	64.12
KRH64579	Soybean	endoplasmic reticulum	64.62	63.81
Bra006017.1-P	Field mustard	plastid	62.92	63.46
KRH53343	Soybean	mitochondrion	65.47	63.45
GSMUA_Achr3P18980_001	Banana	mitochondrion	60.17	61.74
TraesCS4B01G071500.1	Wheat	mitochondrion	60.17	60.94
TraesCS5B01G121400.3	Wheat	mitochondrion	60.38	60.77
TraesCS5D01G126700.1	Wheat	mitochondrion	60.17	60.55
PGSC0003DMT400063962	Potato	mitochondrion, plastid	60.38	60.51
TraesCS5A01G120000.3	Wheat	mitochondrion	59.96	60.34
Solyc06g059840.2.1	Tomato	mitochondrion	58.26	60.31
Os12t0183100-01	Rice	mitochondrion	62.08	60.29
PGSC0003DMT400033905	Potato	mitochondrion	58.05	60.09
HORVU5Hr1G034820.3	Barley	mitochondrion	59.32	59.7
Solyc04g063350.2.1	Tomato	mitochondrion	59.11	59.11
Zm00001d023694_P001	Maize	mitochondrion	61.02	59.02
Solyc12g055890.1.1	Tomato	mitochondrion	35.59	56.57
PGSC0003DMT400012840	Potato	cytosol, mitochondrion, plasma membrane	32.63	56.41
KXG23145	Sorghum	mitochondrion	60.38	56.32
Solyc12g055880.1.1	Tomato	cytosol	15.25	53.33
Bra017890.1-P	Field mustard	cytosol	5.08	26.67
Bra035416.1-P	Field mustard	mitochondrion	21.61	26.22
Bra016238.1-P	Field mustard	mitochondrion	20.97	24.75
Bra012418.1-P	Field mustard	mitochondrion	20.34	24.24
Bra024643.1-P	Field mustard	mitochondrion	19.49	23.77
Bra032619.1-P	Field mustard	plastid	19.28	21.41
Bra033286.1-P	Field mustard	plastid	19.07	21.13

Protein Annotations

EnsemblPlants:Bra017912.1	EnsemblPlants:Bra017912.1-P	EnsemblPlantsGene:Bra017912	Gene3D:3.40.50.970	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016624	GO:GO:0055114	InterPro:DH_E1	InterPro:THDP-binding
PANTHER:PTHR43380	PANTHER:PTHR43380:SF2	PFAM:PF00676	SUPFAM:SSF52518	UniParc:UPI000253F0C3	UniProt:M4DN25
MapMan:4.2.7.2.1.1	:	:	:	:	:

Description

AT1G21400 (E=5e-244) | 2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative

Coordinates

chrA06:+:8801572..8804214

Molecular Weight (calculated)

53399.9 Da

IEP (calculated)

6.252

GRAVY (calculated)

-0.479

Length

472 amino acids

Sequence
(BLAST)

001: MAMWFARSRN LVSILRQNLG LSATLIKRNH SSPRPVFTNY QLSSRVFLDP STSFRHESTA VETQPDLVQQ SDHEDDAQEL DFPGGKVGYT SEMKFIPESS
101: SRRIPCYRVL NEHGKIISDS DFIPVSEKLA VRMYEQMATL QVMDHIFYEA QRQGRISFYL TSVGEEAINI ASAAALSPED VVLPQYREPG VLLWRGFTLE
201: EFANQCFGNK ADYGKGRQMP IHYGSNQHNY FTVSSPIATQ LPQAAGVGYA LKMEKKNACA VTFIGDGGTS EGDFHAGLNF AAVMEAPVVF ICRNNGWAIS
301: THISEQFRSD GIVVKGQAYG IRSIRVDGND ALAVYSAVRS AREMAVTEQR PVLIEAMTYR VGHHSTSDDS TKYREADEIQ YWKMSRNPVN RFKKWVEDNG
401: WWSEEDESKL RSSTRKQLLQ AIQAAEKWEK QPLTELFNDV YDVKTKNLEE QEVGLKALVE KQPQDYPTGF HI

Best Arabidopsis Sequence Match ( AT1G21400.1 )
(BLAST)

001: MAIWFARSKT LVSSLRHNLN LSTILIKRDY SHRPIFYTTS QLSSTAYLSP FGSLRHESTA VETQADHLVQ QIDEVDAQEL DFPGGKVGYT SEMKFIPESS
101: SRRIPCYRVL DEDGRIIPDS DFIPVSEKLA VRMYEQMATL QVMDHIFYEA QRQGRISFYL TSVGEEAINI ASAAALSPDD VVLPQYREPG VLLWRGFTLE
201: EFANQCFGNK ADYGKGRQMP IHYGSNRLNY FTISSPIATQ LPQAAGVGYS LKMDKKNACT VTFIGDGGTS EGDFHAGLNF AAVMEAPVVF ICRNNGWAIS
301: THISEQFRSD GIVVKGQAYG IRSIRVDGND ALAVYSAVRS AREMAVTEQR PVLIEMMTYR VGHHSTSDDS TKYRAADEIQ YWKMSRNPVN RFRKWVEDNG
401: WWSEEDESKL RSNARKQLLQ AIQAAEKWEK QPLTELFNDV YDVKPKNLEE QELGLKELVK KQPQDYPPGF HV

Arabidopsis Description

Thiamin diphosphate-binding fold (THDP-binding) superfamily protein [Source:TAIR;Acc:AT1G21400]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.