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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 3
  • mitochondrion 8
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:mitochondrion
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
 endoplasmic reticulum: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH53343 Soybean mitochondrion 93.72 91.99
Solyc06g059850.1.1 Tomato cytosol 55.65 70.0
Bra016423.1-P Field mustard mitochondrion 64.23 65.18
CDX96593 Canola mitochondrion 63.81 64.76
VIT_18s0001g14980.t01 Wine grape plastid 63.81 64.76
Bra017912.1-P Field mustard mitochondrion 63.81 64.62
CDY50237 Canola mitochondrion 63.81 64.62
CDY65512 Canola mitochondrion 63.6 64.41
GSMUA_Achr3P18980_001 Banana mitochondrion 61.92 64.35
CDY65109 Canola mitochondrion 63.18 63.85
TraesCS4B01G071500.1 Wheat mitochondrion 60.25 61.8
TraesCS5B01G121400.3 Wheat mitochondrion 60.46 61.62
TraesCS5D01G126700.1 Wheat mitochondrion 60.25 61.41
TraesCS5A01G120000.3 Wheat mitochondrion 59.83 60.98
Os12t0183100-01 Rice mitochondrion 61.51 60.49
Zm00001d023694_P001 Maize mitochondrion 61.72 60.45
KRH64030 Soybean mitochondrion, plastid 59.41 59.92
PGSC0003DMT400033905 Potato mitochondrion 57.11 59.87
HORVU5Hr1G034820.3 Barley mitochondrion 58.58 59.7
PGSC0003DMT400063962 Potato mitochondrion, plastid 58.58 59.45
Solyc06g059840.2.1 Tomato mitochondrion 56.49 59.21
Solyc04g063350.2.1 Tomato mitochondrion 58.37 59.11
KXG23145 Sorghum mitochondrion 62.34 58.89
Solyc12g055880.1.1 Tomato cytosol 16.32 57.78
KRG99480 Soybean cytosol 24.48 57.64
AT1G21400.5 Thale cress plastid 62.97 57.44
KRH53908 Soybean cytosol 14.23 56.67
Solyc12g055890.1.1 Tomato mitochondrion 34.52 55.56
PGSC0003DMT400012840 Potato cytosol, mitochondrion, plasma membrane 30.54 53.48
AT5G34780.1 Thale cress cytosol, mitochondrion 33.68 44.11
KRG99219 Soybean mitochondrion 17.36 24.13
KRH45768 Soybean mitochondrion 19.87 24.11
KRH69435 Soybean mitochondrion 19.87 23.99
KRH74712 Soybean mitochondrion 18.2 23.77
KRH47800 Soybean plastid 20.71 22.92
KRH68960 Soybean plastid 19.67 22.49
KRG97240 Soybean plastid 19.87 22.25
KRH06359 Soybean nucleus 20.08 22.22
KRG95283 Soybean cytosol, mitochondrion, plastid 6.28 18.29
Protein Annotations
EMBL:ACUP02002770EnsemblPlants:KRH64579EnsemblPlantsGene:GLYMA_04G243000EntrezGene:100789693Gene3D:3.40.50.970GO:GO:0003674
GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0016624GO:GO:0055114InterPro:DH_E1
InterPro:THDP-bindingPANTHER:PTHR43380PANTHER:PTHR43380:SF2PFAM:PF00676ProteinID:KRH64579ProteinID:KRH64579.1
SUPFAM:SSF52518UniParc:UPI000233A212UniProt:I1JYZ2MapMan:4.2.7.2.1.1::
Description
hypothetical protein
Coordinates
chr4:-:51109236..51115203
Molecular Weight (calculated)
54338.3 Da
IEP (calculated)
7.367
GRAVY (calculated)
-0.506
Length
478 amino acids
Sequence
(BLAST)
001: MTSWLLGRSS RILIHQQQQL HKGPFLNYNS SCSSFRSTEP FRCRDALPGK NSSPTLFRFW RHESTKAEAQ LELEQDVTED DPKQIIDFPG GKVGFTSEMR
101: FISESPQKRV PCYRVLDGNG EILKYSDYVQ VGKEMGVKMY SDMVTLQTMD SIFYEVQRQG RISFYLTQMG EEAVNIASAA ALSPDDIILP QYREPGVLLW
201: RGFTLQQFVH QCFGNTHDFG KGRQMPIHYG SNKHNYFTVS SPIATQLPQA VGAAYSLKMD GKSACAVTFC GDGATSEGDF HAAMNFAAVM EAPVVFICRN
301: NGWAISTPVE DQFRSDGIVV KGKAYGIWSI RVDGNDALAV YSAVHTAREI AIREKRPVLI EALTYRVGHH STSDDSTKYR GTGEIEYWKT ARNPVNRFKR
401: WVERNDWWSD KDELELRSSV RKQLMHAIQV AEKAQKPPLE DLFSDVYDQL PSNLQEQERL LRKTIQKHPK DYPSDVPL
Best Arabidopsis Sequence Match ( AT5G09300.1 )
(BLAST)
001: MALHLRSSFS SKSTLLNILR HNLGFGSRSH VTRHIRQILP HDPPLRGSQN PISRLCNTMA EPETLSSFVQ HEYANNHQVM DFPGGKVAFT PEIQFISESD
101: KERVPCYRVL DDNGQLITNS QFVQVSEEVA VKIYSDMVTL QIMDNIFYEA QRQGRLSFYA TAIGEEAINI ASAAALTPQD VIFPQYREPG VLLWRGFTLQ
201: EFANQCFGNK SDYGKGRQMP VHYGSNKLNY FTVSATIATQ LPNAVGAAYS LKMDKKDACA VTYFGDGGTS EGDFHAALNI AAVMEAPVLF ICRNNGWAIS
301: TPTSDQFRSD GVVVKGRAYG IRSIRVDGND ALAMYSAVHT AREMAIREQR PILIEALTYR VGHHSTSDDS TRYRSAGEIE WWNKARNPLS RFRTWIESNG
401: WWSDKTESDL RSRIKKEMLE ALRVAEKTEK PNLQNMFSDV YDVPPSNLRE QELLVRQTIN SHPQDYPSDV PL
Arabidopsis Description
2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JL2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.