Factsheet for Zm00001d023694_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 27297264
mitochondrion: 29575040

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG23145	Sorghum	mitochondrion	92.21	88.93
Os12t0183100-01	Rice	mitochondrion	82.99	83.33
TraesCS5B01G121400.3	Wheat	mitochondrion	79.51	82.73
TraesCS5D01G126700.1	Wheat	mitochondrion	79.3	82.52
TraesCS4B01G071500.1	Wheat	mitochondrion	78.69	82.4
TraesCS5A01G120000.3	Wheat	mitochondrion	78.69	81.88
HORVU5Hr1G034820.3	Barley	mitochondrion	77.87	81.02
Solyc06g059850.1.1	Tomato	cytosol	58.4	75.0
GSMUA_Achr3P18980_001	Banana	mitochondrion	70.29	74.57
VIT_18s0001g14980.t01	Wine grape	plastid	62.5	64.76
VIT_04s0044g01490.t01	Wine grape	mitochondrion	63.73	64.66
CDX81122	Canola	plastid	60.86	63.6
AT5G09300.1	Thale cress	plastid	61.48	63.56
Bra006017.1-P	Field mustard	plastid	60.66	63.25
KRG99480	Soybean	cytosol	26.23	63.05
CDX78354	Canola	plastid	60.86	62.92
KRH64579	Soybean	endoplasmic reticulum	60.45	61.72
PGSC0003DMT400060275	Potato	mitochondrion	59.02	61.67
Solyc05g056480.2.1	Tomato	plastid	58.81	61.46
Solyc04g063350.2.1	Tomato	mitochondrion	59.43	61.44
CDY65512	Canola	mitochondrion	59.22	61.23
KRH64030	Soybean	mitochondrion, plastid	59.43	61.18
CDY50237	Canola	mitochondrion	59.02	61.02
Bra017912.1-P	Field mustard	mitochondrion	59.02	61.02
PGSC0003DMT400063962	Potato	mitochondrion, plastid	58.4	60.51
KRH53343	Soybean	mitochondrion	60.25	60.37
Bra016423.1-P	Field mustard	mitochondrion	58.2	60.3
CDX96593	Canola	mitochondrion	57.79	59.87
PGSC0003DMT400033905	Potato	mitochondrion	55.33	59.21
Solyc06g059840.2.1	Tomato	mitochondrion	55.33	59.21
KRH53908	Soybean	cytosol	14.55	59.17
PGSC0003DMT400012840	Potato	cytosol, mitochondrion, plasma membrane	32.99	58.97
CDY65109	Canola	mitochondrion	56.97	58.77
Solyc12g055880.1.1	Tomato	cytosol	15.98	57.78
Solyc12g055890.1.1	Tomato	mitochondrion	34.63	56.9
AT1G21400.5	Thale cress	plastid	60.04	55.92
AT5G34780.1	Thale cress	cytosol, mitochondrion	31.35	41.92
Zm00001d014833_P001	Maize	cytosol, golgi	5.74	31.11
Zm00001d017985_P001	Maize	mitochondrion	22.54	28.21
Zm00001d052289_P001	Maize	mitochondrion	22.13	27.69
Zm00001d044748_P002	Maize	mitochondrion	22.13	27.55
Zm00001d014514_P001	Maize	cytosol, mitochondrion, plastid	7.58	27.01
Zm00001d004473_P001	Maize	plastid	21.52	24.53

Protein Annotations

EntrezGene:100191513	Gene3D:3.40.50.970	MapMan:4.2.7.2.1.1	ProteinID:AQK39792.1	UniProt:B4F923	EMBL:BT033611
EMBL:BT034256	EMBL:BT034340	EMBL:BT040619	InterPro:DH_E1	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016624	GO:GO:0055114	PFAM:PF00676	PANTHER:PTHR43380
PANTHER:PTHR43380:SF2	SUPFAM:SSF52518	InterPro:THDP-binding	UniParc:UPI00017B61F3	EnsemblPlantsGene:Zm00001d023694	EnsemblPlants:Zm00001d023694_P001
EnsemblPlants:Zm00001d023694_T001	SEG:seg	:	:	:	:

Description

2-oxoisovalerate dehydrogenase subunit alpha 2 mitochondrial

Coordinates

chr10:+:15875150..15878959

Molecular Weight (calculated)

54224.8 Da

IEP (calculated)

6.364

GRAVY (calculated)

-0.377

Length

488 amino acids

Sequence
(BLAST)

001: MASLWLARAS SQLARRAAAR RPPPRPARHG SGQPTSSWFL GSVPQAALGS PALDTSRRGF CSVRRFAGES SAAAAAAAVV DEEPESGFAA GDQQAVDFPG
101: GKVSFVAEMN FLPESTRERI NCYRVLDDDG RTISGSRFQE VSRELALKMY SEMVTLQIMD TIFYEAQRQG RISFYLTSNG EEAINIASAA ALSMDDIVLP
201: QYREPGVLLW RGFTLQEFAN QCFGNKLDYG KGRQMPIHYG SNRLNYFTVS SPIATQLPHA VGAAYSLKMD KKDACAITYF GDGGTSEGDF HAALNFAAVM
301: EAPVIFFCRN NGWAISTPTT EQFRSDGVVI RGQAYGIRGI RVDGNDALAV YSAIHAAREM AVTEGRPILV EALTYRVGHH STSDDSTKYR PVDEIEHWRT
401: ARDPISRYRK WVQGNDWWSD AEESELRSRV RKELLQAIQV AERMPKPPVT ELFTDVYDKI PSNLHEQEQL LRDTIMRHPA DYPTDVPV

Best Arabidopsis Sequence Match ( AT5G09300.1 )
(BLAST)

001: MALHLRSSFS SKSTLLNILR HNLGFGSRSH VTRHIRQILP HDPPLRGSQN PISRLCNTMA EPETLSSFVQ HEYANNHQVM DFPGGKVAFT PEIQFISESD
101: KERVPCYRVL DDNGQLITNS QFVQVSEEVA VKIYSDMVTL QIMDNIFYEA QRQGRLSFYA TAIGEEAINI ASAAALTPQD VIFPQYREPG VLLWRGFTLQ
201: EFANQCFGNK SDYGKGRQMP VHYGSNKLNY FTVSATIATQ LPNAVGAAYS LKMDKKDACA VTYFGDGGTS EGDFHAALNI AAVMEAPVLF ICRNNGWAIS
301: TPTSDQFRSD GVVVKGRAYG IRSIRVDGND ALAMYSAVHT AREMAIREQR PILIEALTYR VGHHSTSDDS TRYRSAGEIE WWNKARNPLS RFRTWIESNG
401: WWSDKTESDL RSRIKKEMLE ALRVAEKTEK PNLQNMFSDV YDVPPSNLRE QELLVRQTIN SHPQDYPSDV PL

Arabidopsis Description

2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JL2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.