CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006017.1-P	Field mustard	plastid	98.31	99.15
CDX81122	Canola	plastid	93.22	94.22
AT5G09300.1	Thale cress	plastid	87.08	87.08
VIT_04s0044g01490.t01	Wine grape	mitochondrion	67.16	65.9
GSMUA_Achr3P18980_001	Banana	mitochondrion	62.92	64.57
PGSC0003DMT400060275	Potato	mitochondrion	63.14	63.81
KRG99480	Soybean	cytosol	27.33	63.55
Solyc05g056480.2.1	Tomato	plastid	62.71	63.38
CDX96593	Canola	mitochondrion	63.14	63.27
CDY50237	Canola	mitochondrion	63.14	63.14
TraesCS4B01G071500.1	Wheat	mitochondrion	62.29	63.09
TraesCS5B01G121400.3	Wheat	mitochondrion	62.5	62.9
CDY65512	Canola	mitochondrion	62.71	62.71
TraesCS5D01G126700.1	Wheat	mitochondrion	62.29	62.69
TraesCS5A01G120000.3	Wheat	mitochondrion	62.08	62.47
CDY65109	Canola	mitochondrion	62.08	61.95
KRH64030	Soybean	mitochondrion, plastid	62.08	61.81
HORVU5Hr1G034820.3	Barley	mitochondrion	61.23	61.62
Os12t0183100-01	Rice	mitochondrion	63.14	61.32
Zm00001d023694_P001	Maize	mitochondrion	62.92	60.86
KRH53908	Soybean	cytosol	15.25	60.0
KXG23145	Sorghum	mitochondrion	63.56	59.29
CDY31596	Canola	mitochondrion	4.45	31.34
CDY70124	Canola	cytosol	9.53	31.03
CDY55062	Canola	cytosol	10.59	26.6
CDY37427	Canola	cytosol, mitochondrion, plastid	8.26	25.32
CDY33613	Canola	mitochondrion	20.76	25.19
CDY24500	Canola	mitochondrion	20.55	24.94
CDY38784	Canola	mitochondrion	20.55	24.74
CDY11622	Canola	mitochondrion	20.55	24.74
CDY40292	Canola	mitochondrion	20.13	24.05
CDY28458	Canola	mitochondrion	20.13	24.05
CDY16236	Canola	mitochondrion	19.28	23.51
CDY37473	Canola	plastid	20.13	22.46
CDY37428	Canola	cytosol	6.99	22.45
CDY32445	Canola	plastid	20.13	22.35
CDX90009	Canola	plastid	19.92	22.07
CDY15202	Canola	plastid	19.92	21.91
CDY14675	Canola	cytosol	18.64	20.0
CDY55064	Canola	plasma membrane	12.5	17.99

Protein Annotations

EnsemblPlants:CDX78354	EnsemblPlantsGene:GSBRNA2T00129719001	Gene3D:3.40.50.970	GO:A0A078CQK5	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016624	InterPro:DH_E1	InterPro:THDP-binding	PANTHER:PTHR43380
PANTHER:PTHR43380:SF2	PFAM:PF00676	ProteinID:CDX78354	ProteinID:CDX78354.1	SEG:seg	SUPFAM:SSF52518
UniParc:UPI0004EDBB8C	MapMan:4.2.7.2.1.1	:	:	:	:

Description

BnaA03g02660D

Coordinates

chrLK031815:-:362895..365097

Molecular Weight (calculated)

53169.7 Da

IEP (calculated)

6.616

GRAVY (calculated)

-0.402

Length

472 amino acids

Sequence
(BLAST)

001: MAQHLKSSSK SILLNILRHN IGFSSPSHAS RHLRHNLPHG PLSTRLSPNP ITRYCNTMVD TLSSIGSHED TNIFINVQVM DFPGGKVAFT PEIHFISESN
101: EERVPCYRVL DDNGQQLTNS RFIPVSKEIA VKMYSDMVTL QMMDNIFYEA QRQGRLSFYA TAFGEEAINI ASAAALSPDD VIFPQYREPG VLLWRGFTLQ
201: EFANQCFGNK SDYGKGRQMP VHYGSNKLNY FTVSATIATQ LPNAVGAAYS LKMDEKDACA VTFFGDGGSS EGDFHAALNF AAVMEAPVLF ICRNNGWAIS
301: TPTSDQFRSD GVVVKGRAYG IRSIRVDGND ALAMYSAVHE AREMAIREHR PILIEALTYR VGHHSTSDDS TRYRSADEIE WWNKARNPLS RFRTWVESNG
401: WWSDEAESDL RSKIKKEMLE AIRVAEKTEK PNLNHMFSDV YDVPPLNLRE QELLVRQAIK SHPQDYPSDV PL

Best Arabidopsis Sequence Match ( AT5G09300.1 )
(BLAST)

001: MALHLRSSFS SKSTLLNILR HNLGFGSRSH VTRHIRQILP HDPPLRGSQN PISRLCNTMA EPETLSSFVQ HEYANNHQVM DFPGGKVAFT PEIQFISESD
101: KERVPCYRVL DDNGQLITNS QFVQVSEEVA VKIYSDMVTL QIMDNIFYEA QRQGRLSFYA TAIGEEAINI ASAAALTPQD VIFPQYREPG VLLWRGFTLQ
201: EFANQCFGNK SDYGKGRQMP VHYGSNKLNY FTVSATIATQ LPNAVGAAYS LKMDKKDACA VTYFGDGGTS EGDFHAALNI AAVMEAPVLF ICRNNGWAIS
301: TPTSDQFRSD GVVVKGRAYG IRSIRVDGND ALAMYSAVHT AREMAIREQR PILIEALTYR VGHHSTSDDS TRYRSAGEIE WWNKARNPLS RFRTWIESNG
401: WWSDKTESDL RSRIKKEMLE ALRVAEKTEK PNLQNMFSDV YDVPPSNLRE QELLVRQTIN SHPQDYPSDV PL

Arabidopsis Description

2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JL2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.