CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99480	Soybean	cytosol	67.5	39.9
KRH64030	Soybean	mitochondrion, plastid	83.33	21.1
HORVU5Hr1G034820.3	Barley	mitochondrion	63.33	16.2
TraesCS4B01G071500.1	Wheat	mitochondrion	62.5	16.09
TraesCS5D01G126700.1	Wheat	mitochondrion	62.5	15.99
TraesCS5B01G121400.3	Wheat	mitochondrion	62.5	15.99
PGSC0003DMT400060275	Potato	mitochondrion	61.67	15.85
TraesCS5A01G120000.3	Wheat	mitochondrion	61.67	15.78
Os12t0183100-01	Rice	mitochondrion	62.5	15.43
CDX81122	Canola	plastid	60.0	15.42
Solyc05g056480.2.1	Tomato	plastid	60.0	15.42
Bra006017.1-P	Field mustard	plastid	60.0	15.38
AT5G09300.1	Thale cress	plastid	60.0	15.25
CDX78354	Canola	plastid	60.0	15.25
VIT_04s0044g01490.t01	Wine grape	mitochondrion	60.0	14.97
GSMUA_Achr3P18980_001	Banana	mitochondrion	56.67	14.78
Zm00001d023694_P001	Maize	mitochondrion	59.17	14.55
KXG23145	Sorghum	mitochondrion	60.0	14.23
KRH64579	Soybean	endoplasmic reticulum	56.67	14.23
KRH53343	Soybean	mitochondrion	57.5	14.17
KRG99219	Soybean	mitochondrion	24.17	8.43
KRH45768	Soybean	mitochondrion	27.5	8.38
KRH74712	Soybean	mitochondrion	25.0	8.2
KRH69435	Soybean	mitochondrion	25.83	7.83
KRH06359	Soybean	nucleus	25.0	6.94
KRH68960	Soybean	plastid	23.33	6.7
KRG97240	Soybean	plastid	23.33	6.56
KRH47800	Soybean	plastid	23.33	6.48
KRG95283	Soybean	cytosol, mitochondrion, plastid	0.0	0.0

Protein Annotations

EMBL:ACUP02003489	EnsemblPlants:KRH53908	EnsemblPlantsGene:GLYMA_06G154300	Gene3D:3.40.50.970	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016624	GO:GO:0055114	InterPro:DH_E1	InterPro:THDP-binding
PANTHER:PTHR43380	PANTHER:PTHR43380:SF2	PFAM:PF00676	ProteinID:KRH53908	ProteinID:KRH53908.1	SUPFAM:SSF52518
UniParc:UPI0006ED8E6E	UniProt:A0A0R0JR05	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:12580596..12584122

Molecular Weight (calculated)

13993.4 Da

IEP (calculated)

7.676

GRAVY (calculated)

-0.708

Length

120 amino acids

Sequence
(BLAST)

001: MKGQAYGVRS IGDGNDAPAI YSAIQAARQM AITEERPILI EALTYRVGHH TTSDDSTKYR PANEIEWWRL TRDPVARFRK WIEKNGWWND MAESQLINNL
101: RQQARYTSLN PLIDDNWIPF

Best Arabidopsis Sequence Match ( AT1G21400.2 )
(BLAST)

001: MKFIPESSSR RIPCYRVLDE DGRIIPDSDF IPVSEKLAVR MYEQMATLQV MDHIFYEAQR QGRISFYLTS VGEEAINIAS AAALSPDDVV LPQYREPGVL
101: LWRGFTLEEF ANQCFGNKAD YGKGRQMPIH YGSNRLNYFT ISSPIATQLP QAAGVGYSLK MDKKNACTVT FIGDGGTSEG DFHAGLNFAA VMEAPVVFIC
201: RNNGWAISTH ISEQFRSDGI VVKGQAYGIR SIRVDGNDAL AVYSAVRSAR EMAVTEQRPV LIEMMTYRVG HHSTSDDSTK YRAADEIQYW KMSRNPVNRF
301: RKWVEDNGWW SEEDESKLRS NARKQLLQAI QAAEKWEKQP LTELFNDVYD VKPKNLEEQE LGLKELVKKQ PQDYPPGFHV

Arabidopsis Description

Thiamin diphosphate-binding fold (THDP-binding) superfamily protein [Source:TAIR;Acc:AT1G21400]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.